Pairwise Alignments

Query, 92 a.a., helix-turn-helix transcriptional regulator from Methanococcus maripaludis JJ

Subject, 121 a.a., winged helix-turn-helix domain-containing protein from Methanococcus maripaludis JJ

 Score = 59.3 bits (142), Expect = 1e-14
 Identities = 31/87 (35%), Positives = 56/87 (64%), Gaps = 4/87 (4%)

Query: 1  MINKKHVKEILYLLNSVEELYFAEICNNIPEAHKGSINRTLQELYDFKMVSKREEGT--- 57
          +++K + KEIL LLN   ELYF +I   + +  K +++R + EL +  +V+KR E T   
Sbjct: 5  ILSKSNAKEILMLLNEYGELYFGQIHKEL-DKPKSNLSRVISELQEEGLVNKRTEETDED 63

Query: 58 AKLSKTFYSITDLGKESLKFYELEKEV 84
           ++ K +YS+T+LGK +++ Y+ E ++
Sbjct: 64 GRIPKNYYSLTNLGKIAIEIYQKEDKM 90