Pairwise Alignments

Query, 612 a.a., indolepyruvate ferredoxin oxidoreductase subunit alpha from Methanococcus maripaludis JJ

Subject, 1177 a.a., hypothetical protein from Azospirillum sp. SherDot2

 Score = 82.4 bits (202), Expect = 1e-19
 Identities = 118/539 (21%), Positives = 214/539 (39%), Gaps = 81/539 (15%)

Query: 99  KGPLVLLVTDDPGPHSSQTEQDTRSFGLFSNIPVLDPSNSQEAYEMTKYAFEISKSYETP 158
           +G +++L  DD    SS T   +    + + +P+L PS   E  E   + + +S+     
Sbjct: 142 RGGVLVLAGDDHTCKSSTTSHQSEYALVDAMMPILSPSGIPEMIEYGLHGWALSRLSGCW 201

Query: 159 VILRTTTRVSHRCDDVVLEEIKP-----SNENIEGFSKSSRWAIFPK-LTAKRHPILEKL 212
             ++ T  ++ R   + L+   P     ++  +     + RW   P+   A+ H  L K+
Sbjct: 202 TAMKVTADLTDRSVSMTLDPALPVIRLPTDLVLPPGGLNIRWPDSPQEQEARLH--LHKI 259

Query: 213 QKTLSNEFSDSEFNFKTGTG------KIGIITSGASYHYVNETISNNKEL---------- 256
              L+   ++       G+G      + GI+T+G +Y  V + ++   EL          
Sbjct: 260 PAALAYVRANGLNRVALGSGGGGADARFGIVTAGKAYLDVRQALA---ELGIDEDRAAAL 316

Query: 257 -FSVLKIGTPHPFPENKLLEFTNEVDSIIVVEELDSYLEDQLLQLL-GKIGISKP-VYGK 313
             +V K+  P P   + L  F   +D I+VVEE    +E Q+  +L G     +P V GK
Sbjct: 317 GIAVFKVAVPWPLEPDSLRSFAAGLDEILVVEEKRPLIEGQIKDILYGLPADRRPRVIGK 376

Query: 314 KNN----IFPCCGEYSVDIVKIGINKVLDSLKLQ-KLEISEKLIDKTDIISLPVRP---- 364
            +     +     E SV  + + + + L    ++   +   +L + T   + P  P    
Sbjct: 377 HDESGAPLLRSHDELSVAEIAVAVARRLARCGVEVDADALARLQNTTGTANRPGGPVAKR 436

Query: 365 -PNLCAGCMHRTVFYAFKEVSKELKKHNIQTIFSGDIGCYTLGNAPPLELIDTCLCMGAG 423
            P  C+GC H +      +V +  + H         IGC+ +  A   +   T   MGA 
Sbjct: 437 TPYFCSGCPHNSS----TKVPEGSRAH-------AGIGCHWMSQAMDRDTA-TYTHMGAE 484

Query: 424 ISIAGGISRTTKNSKNVAFIGDSTFFHSGIPAVINAVYNNADVTIAVLDNRTTAMTGHQP 483
            +   G++           IGD T+FHSG+ A+  AV    ++T  +L N   AMTG Q 
Sbjct: 485 GANWVGLAPFVPTRHIFQNIGDGTYFHSGLLAIRAAVAGGVNITYKILFNDAVAMTGGQS 544

Query: 484 HPGTGKTALGNLTKLIDIEGILKSCGVE--------------FVKTVSADDFSACKEISK 529
           H   G+     +   +  EG+ +   V               +V     DD  A   + +
Sbjct: 545 H--DGQLTPQAIAWQVRAEGVQRIAVVSDEPEKYGLSSGLPPYVTIHHRDDLDA---VQR 599

Query: 530 EAIDYNGPSAVVFRGNCVS----------IVKSDKKYAIDKNKCISCKICVERLGCPAI 578
           E  +  G SA+++   C +          +    ++  I++  C  C  C  +  C ++
Sbjct: 600 EFREVPGVSALIYDQTCAAEKRRRRKRGKLPDPGRRVVINERVCEGCGDCSTQSNCLSV 658