Pairwise Alignments

Query, 295 a.a., glycine betaine ABC transporter substrate-binding protein from Methanococcus maripaludis JJ

Subject, 287 a.a., glycine betaine ABC transporter substrate-binding protein from Paraburkholderia sabiae LMG 24235

 Score =  153 bits (387), Expect = 4e-42
 Identities = 89/269 (33%), Positives = 146/269 (54%), Gaps = 9/269 (3%)

Query: 27  STDDTEKGTIKFGLPPWPGVTVKSNVVKVILEEQGYNVELNQLDAGITYAKLADGDLDVS 86
           +T   E  +I  G+  W      +N+ KV+L+E+G  V+L   D  + Y  +A G +D++
Sbjct: 21  ATARAEDKSITIGVNNWAENIAVANMWKVLLDEKGIKVQLQNADKALIYNSVAQGKIDLT 80

Query: 87  LAGWLPTTHEEYWTQYGNQLEMVHVNVGKTALGLAVPTYTYEAGIQSITDLNGNEELFDG 146
              WLP+  +  + +  +++  +     +  LGL VP Y     + SI  LN N+ LF  
Sbjct: 81  FEVWLPSGDKPAFDKVKDRVVQIGPWFKEANLGLVVPDYV---AVDSIDQLNANKTLFAS 137

Query: 147 ----KIIGIEPGAGIMSNTEKAIDSYSLSGYELQSSSTPAMMAELARAINEDENIVVTVW 202
               KI+GI+ G+ +M  TEKA  +Y L  Y++QSSS  AM+  L RAI   E +VVT+W
Sbjct: 138 AGRPKIVGIDSGSSLMQLTEKAKKAYQLD-YDIQSSSESAMVLSLERAIQRKEPVVVTLW 196

Query: 203 EPHSVFFKFDIKMLDDPEKVYGNGDKVYTIARTDFKDDYPEVYEFFQKFEVDPSVQSEWI 262
           +PH ++ K+ +K L DP+  YG  D +Y I    F++ +P+V  + Q++++D +     +
Sbjct: 197 KPHWIWSKYKLKYLKDPKGAYGATDSIYGIETQAFRNQHPDVERWLQQWKMDDNSLGGLM 256

Query: 263 YKYSDEGMD-PEEVAEEWVANNPELVANW 290
            +   +G   PE+ A+ WV  N  LV  W
Sbjct: 257 SEIIRQGASTPEKGAKAWVDANRPLVQQW 285