Pairwise Alignments

Query, 247 a.a., RNA polymerase sigma-70 RpoE type from Marinobacter adhaerens HP15

Subject, 239 a.a., RNA polymerase sigma factor from Paraburkholderia sabiae LMG 24235

 Score = 97.1 bits (240), Expect = 3e-25
 Identities = 53/183 (28%), Positives = 94/183 (51%), Gaps = 6/183 (3%)

Query: 55  PDSQTDLQLVRKVRNGDRAAFDLLVVKYQSRVASIISRYVYDSQEVMDLTQETFVKAFRA 114
           P    DL++  ++  GDRAAF+LL+ ++  R+  +    + +  E  D  Q+ ++ A+R+
Sbjct: 17  PRPDDDLEIAHRIAAGDRAAFELLMRRHNRRLYRLARATLRNDAEAEDALQDAYLNAYRS 76

Query: 115 IERFRGDSAFYTWLYRIAVNTAKNYLESRGRRP------QGSADSAEAENFDDGSRLRDT 168
           I +FRGD+  +TWL R+ +N     +    RR           D  +  +    +   D 
Sbjct: 77  IAQFRGDAKLFTWLSRLVLNECFARMRREARRQNVVPILHDCPDDEQMSSTMHTTNAHDY 136

Query: 169 ASPERLLQREQLQKELNKAIAQLPEELRSAFLLREYDGLSYEDIAGILECPIGTVRSRIF 228
            +P++   R +++  L + +  LP   R+ F+LR  + +S E+ A  L+ P  TVRSR F
Sbjct: 137 NAPDQAAARAEIRALLERKLDALPAGFRTVFVLRSVEEMSVEETAQCLDIPEATVRSRHF 196

Query: 229 RAR 231
           RA+
Sbjct: 197 RAK 199