Pairwise Alignments

Query, 247 a.a., RNA polymerase sigma-70 RpoE type from Marinobacter adhaerens HP15

Subject, 199 a.a., RNA polymerase sigma factor RpoE from Paraburkholderia sabiae LMG 24235

 Score =  214 bits (544), Expect = 1e-60
 Identities = 108/190 (56%), Positives = 143/190 (75%), Gaps = 2/190 (1%)

Query: 56  DSQTDLQLVRKVRNGDRAAFDLLVVKYQSRVASIISRYVYDSQEVMDLTQETFVKAFRAI 115
           + + D  LV +V+NGD+AAF+LLV KY  ++  +ISR V D  EV D+ Q+ F+KA+RA+
Sbjct: 3   EKEIDQVLVERVQNGDKAAFELLVSKYHRKIIRLISRLVRDPAEVEDVAQDAFIKAYRAL 62

Query: 116 ERFRGDSAFYTWLYRIAVNTAKNYLESRGRRPQGS--ADSAEAENFDDGSRLRDTASPER 173
            +FRG+SAFYTWLYRIAVNTAKNYL ++GRR   S  AD+ EAE F D  +LRD  +PE 
Sbjct: 63  PQFRGESAFYTWLYRIAVNTAKNYLATQGRRAPTSTEADAEEAETFSDADQLRDINTPES 122

Query: 174 LLQREQLQKELNKAIAQLPEELRSAFLLREYDGLSYEDIAGILECPIGTVRSRIFRARDA 233
           +L  +Q+ + +N A+A LPEELR+A  LRE +GLSYE+IA ++ CPIGTVRSRIFRAR+A
Sbjct: 123 MLMSKQIAETVNAAMAVLPEELRTAITLREIEGLSYEEIAEMMGCPIGTVRSRIFRAREA 182

Query: 234 VDRHLGPLLN 243
           +   L PLL+
Sbjct: 183 IAAKLRPLLD 192