Pairwise Alignments

Query, 247 a.a., RNA polymerase sigma-70 RpoE type from Marinobacter adhaerens HP15

Subject, 191 a.a., RNA polymerase sigma factor RpoE from Pectobacterium carotovorum WPP14

 Score =  210 bits (535), Expect = 1e-59
 Identities = 104/184 (56%), Positives = 144/184 (78%), Gaps = 2/184 (1%)

Query: 60  DLQLVRKVRNGDRAAFDLLVVKYQSRVASIISRYVYDSQEVMDLTQETFVKAFRAIERFR 119
           D  LV +V+ GD+ +F+LLVV+YQ +VAS++SRYV    +V D+ QE+F+KA+RA+E FR
Sbjct: 7   DQVLVERVQKGDQKSFNLLVVRYQHKVASLVSRYVPQG-DVPDVVQESFIKAYRALESFR 65

Query: 120 GDSAFYTWLYRIAVNTAKNYLESRGRRPQGS-ADSAEAENFDDGSRLRDTASPERLLQRE 178
           GDSAFYTWLYRIAVNTAKNYL ++GRRP  S  D+ +AEN+++   L++ ++PE L+  E
Sbjct: 66  GDSAFYTWLYRIAVNTAKNYLVAQGRRPPSSDIDANDAENYENAGALKEISNPENLMLSE 125

Query: 179 QLQKELNKAIAQLPEELRSAFLLREYDGLSYEDIAGILECPIGTVRSRIFRARDAVDRHL 238
           +L+  + + I  LPE+LR A  LRE DGLSYE+IA I++CP+GTVRSRIFRAR+A+D  +
Sbjct: 126 ELRSIVFRTIESLPEDLRLAITLRELDGLSYEEIAVIMDCPVGTVRSRIFRAREAIDNKV 185

Query: 239 GPLL 242
            PL+
Sbjct: 186 QPLI 189