Pairwise Alignments

Query, 247 a.a., RNA polymerase sigma-70 RpoE type from Marinobacter adhaerens HP15

Subject, 191 a.a., RNA polymerase sigma factor RpoE from Dickeya dianthicola 67-19

 Score =  214 bits (546), Expect = 8e-61
 Identities = 106/184 (57%), Positives = 146/184 (79%), Gaps = 2/184 (1%)

Query: 60  DLQLVRKVRNGDRAAFDLLVVKYQSRVASIISRYVYDSQEVMDLTQETFVKAFRAIERFR 119
           D  LV +V+ GDR AF+LLVV+YQ +VAS++SRYV  + +V D+ QE+F+KA+RA+E FR
Sbjct: 7   DQVLVERVQKGDRKAFNLLVVRYQHKVASLVSRYV-PAGDVPDVVQESFIKAYRALESFR 65

Query: 120 GDSAFYTWLYRIAVNTAKNYLESRGRRPQGS-ADSAEAENFDDGSRLRDTASPERLLQRE 178
           G+SAFYTWLYRIAVNTAKNYL ++GRRP  S  D+ +AEN+++ S L++ ++PE L+  E
Sbjct: 66  GESAFYTWLYRIAVNTAKNYLVAQGRRPPSSDVDANDAENYENASALKEISNPENLMLSE 125

Query: 179 QLQKELNKAIAQLPEELRSAFLLREYDGLSYEDIAGILECPIGTVRSRIFRARDAVDRHL 238
           +L++ +   I  LPE+LR A  LRE DGLSYE+IA I++CP+GTVRSRIFRAR+A+D  +
Sbjct: 126 ELRRIVFHTIESLPEDLRLAITLRELDGLSYEEIAAIMDCPVGTVRSRIFRAREAIDNKV 185

Query: 239 GPLL 242
            PL+
Sbjct: 186 QPLI 189