Pairwise Alignments

Query, 592 a.a., tetratricopeptide TPR_2 repeat protein from Marinobacter adhaerens HP15

Subject, 798 a.a., tetratricopeptide repeat protein from Magnetospirillum magneticum AMB-1

 Score = 76.6 bits (187), Expect = 4e-18
 Identities = 81/308 (26%), Positives = 125/308 (40%), Gaps = 9/308 (2%)

Query: 238 AIILKGDLLYQTGQKSSALDYLLTNTRRFPGNRQMGTLYGRMLINEGELQAAQDEFNRLV 297
           A+   G LL QTG+   +LD+L    R  P + ++G  +  +L   G L  ++ EF RL 
Sbjct: 38  ALYAYGVLLAQTGRLPQSLDHLSRAARLAPEDGRIGRNFALVLQAAGRLPESEREFGRLR 97

Query: 298 KRYPDTPGLRLSHALVALENGQTDLARQELTQLAEQGHHTSEANYYLGRIEDQASNIEQA 357
            R PD    R    LV    G+ D A     +         EA   LG     A  +++A
Sbjct: 98  DREPDRAEHRFGLGLVVSAQGRFDEAISHFQEGLALASQDVEARCNLGLACRAAGRLDEA 157

Query: 358 IGYYQSVEQGNYYFPALARA----SSLLAENGQLEDAIDRIRRLREANPRQAENFWLLEV 413
           I  +    +     PALA+A       L   G+  DA+    R     P  AE    + V
Sbjct: 158 IDAFAKAAE---LAPALAKAHGNLGGALFAAGRWADAVGAWGRALALEPNHAEVRADMGV 214

Query: 414 NLLLDQEQQQQALSTATEALEEHPDNIEIRYARAMLYDGIGQPADAEADLKRIIEQEPEN 473
             L    +Q++A      A+E  P N    Y        +G+  DA     ++I   P++
Sbjct: 215 -ALAKLGRQEEAAECFRRAMELDPGNPAHGYNLGRALQDLGRLEDAAEIYAKVIAVAPDH 273

Query: 474 AVALNALGYILTTRTDRLREARGYIEKALRLDPNNPAILDSMGWVLFLEGQLEPALEYLS 533
           A A    G ++  +  +  +A    ++ L LDP N     + G  L+  G++E AL+   
Sbjct: 274 ASAHMNSG-VIFKKLGQPDQAVASYDRVLELDPANGPAWLNRGKALYEAGRVEDALDSFR 332

Query: 534 RAWAAFPD 541
            A    PD
Sbjct: 333 SALRLMPD 340



 Score = 41.2 bits (95), Expect = 2e-07
 Identities = 70/347 (20%), Positives = 119/347 (34%), Gaps = 44/347 (12%)

Query: 99  DQVVIERAMRIAQSLNGDNAQKQLAELWLDIDPDNLQAHRISAIQAVKGNDLQTAIHHME 158
           DQ    RA    +S N   A+     + L   P++++A     +   +   L  ++ H+ 
Sbjct: 2   DQETFARAQAEHRSGNFAVAEPLYGAI-LAASPEHVEALYAYGVLLAQTGRLPQSLDHLS 60

Query: 159 RIM----DQGGDADFDSLAAIAANLPPEQQQELLALYNEMSDRHPDTPELEYSIALLLKV 214
           R      + G      +L   AA   PE ++E    +  + DR PD  E  + + L++  
Sbjct: 61  RAARLAPEDGRIGRNFALVLQAAGRLPESERE----FGRLRDREPDRAEHRFGLGLVVSA 116

Query: 215 TGQPQQALDRLEPLLQENANFQPAIILKGDLLYQTGQKSSALDYLLTNTRRFPGNRQMGT 274
            G+  +A+   +  L   +    A    G      G+   A+D         P   +   
Sbjct: 117 QGRFDEAISHFQEGLALASQDVEARCNLGLACRAAGRLDEAIDAFAKAAELAPALAKAHG 176

Query: 275 LYGRMLINEGELQAAQDEFNRLVKRYPDTPGLRLSHALVALENGQTDLARQELTQLAE-- 332
             G  L   G    A   + R +   P+   +R    +   + G+ + A +   +  E  
Sbjct: 177 NLGGALFAAGRWADAVGAWGRALALEPNHAEVRADMGVALAKLGRQEEAAECFRRAMELD 236

Query: 333 -----QGHHTSEANYYLGRIEDQAS---------------------------NIEQAIGY 360
                 G++   A   LGR+ED A                              +QA+  
Sbjct: 237 PGNPAHGYNLGRALQDLGRLEDAAEIYAKVIAVAPDHASAHMNSGVIFKKLGQPDQAVAS 296

Query: 361 YQSV-EQGNYYFPALARASSLLAENGQLEDAIDRIRRLREANPRQAE 406
           Y  V E      PA       L E G++EDA+D  R      P  A+
Sbjct: 297 YDRVLELDPANGPAWLNRGKALYEAGRVEDALDSFRSALRLMPDDAD 343



 Score = 38.1 bits (87), Expect = 1e-06
 Identities = 38/127 (29%), Positives = 56/127 (44%), Gaps = 2/127 (1%)

Query: 444 YARAMLYDGIGQPADAEADLKRIIEQEPENAVALNALGYILTTRTDRLREARGYIEKALR 503
           +ARA      G  A AE     I+   PE+  AL A G +L  +T RL ++  ++ +A R
Sbjct: 6   FARAQAEHRSGNFAVAEPLYGAILAASPEHVEALYAYG-VLLAQTGRLPQSLDHLSRAAR 64

Query: 504 LDPNNPAILDSMGWVLFLEGQLEPALEYLSRAWAAFPD-PEVAAHYGEALWMNGAEEQAR 562
           L P +  I  +   VL   G+L  +     R     PD  E     G  +   G  ++A 
Sbjct: 65  LAPEDGRIGRNFALVLQAAGRLPESEREFGRLRDREPDRAEHRFGLGLVVSAQGRFDEAI 124

Query: 563 IIWQEGL 569
             +QEGL
Sbjct: 125 SHFQEGL 131