Pairwise Alignments

Query, 172 a.a., phage-related packaging protein from Marinobacter adhaerens HP15

Subject, 181 a.a., DNA-packaging protein from Escherichia coli ECOR38

 Score = 47.0 bits (110), Expect = 2e-10
 Identities = 46/174 (26%), Positives = 73/174 (41%), Gaps = 34/174 (19%)

Query: 10  VNREELAEIFGVSLNTVTSWIRNGCPYEEKGRQGKPWKFNTRDVAEWNREQ-AQIEATGD 68
           VN+++LA+IFG S+ T+ +W   G P    G +G    +++  V +W  E+ A+IE    
Sbjct: 3   VNKKQLADIFGASIRTIQNWQEQGMPVLRGGGKGNEVLYDSAAVIKWYAERDAEIE---- 58

Query: 69  GPMDEYELKLRKLAAEAAQA----------ELDLARDRKLVAPIDEFERAR----AMENA 114
                   KLR+   E  QA          E +  R  +  A   E + AR     +E A
Sbjct: 59  ------NEKLRREVEELRQASETDLQPGTIEYERHRLTRAQADAQELKNARDSAEVVETA 112

Query: 115 TIRANIMNVPGRVVSQLIG---------ETSEARFKEVLSAELIQALESAADSD 159
                +  + G + S L G            E R  + L  ++I+A+  AA  D
Sbjct: 113 FCTFVLSRIAGEIASILDGIPLSVQRRFPELENRHVDFLKRDIIKAMNKAAALD 166