Pairwise Alignments

Query, 653 a.a., phage terminase GpA from Marinobacter adhaerens HP15

Subject, 707 a.a., terminase from Escherichia coli ECRC100

 Score =  111 bits (277), Expect = 1e-28
 Identities = 161/708 (22%), Positives = 275/708 (38%), Gaps = 97/708 (13%)

Query: 20  KRAANHLIPPAPLRPSQWAEENVRIAAGNAIPGPIRFANAPYQREPMDMATHPGCHRISL 79
           +  A+   PP+ L  ++     +R+  G    GP   +  PY  +P++  +      +  
Sbjct: 16  REVASLFRPPSRLPVAEAIRRYMRVPRGANTSGPWESSLTPYMIDPINTLSAREYDAVVF 75

Query: 80  MWGAQVGKTQLALCVQG---YFIAHEPKSQMMMQPSQGDLTTWLETKFNPMVDTNPVLQD 136
           +  A+ GKT+    + G   Y I  +P   +++Q ++        T+ +     +P +  
Sbjct: 76  VGPARTGKTEGL--IDGWIVYGIICDPADMLVVQMTETKAREHSRTRLSRTFRHSPEVSK 133

Query: 137 LIAKPRSHEGVNNQRMKSYPGGFMMYAWAGSTKTMRGRSAPLIVAD------EIDGYGGT 190
            ++  R+   V+++      G F+   W   T         + + D       +DG    
Sbjct: 134 RLSPSRNDNNVHDKMFLD--GSFLKIGWPSITVFSSSDYRRVALTDYDRFPENVDG---- 187

Query: 191 PEGDEVQLLWQRAATFGDQRLLIEISTP--TIKDE-------------SRIEAAFLQGDQ 235
            EGD   L  +R  TF    + +  S+P   I D              + I + + +GD+
Sbjct: 188 -EGDAFTLASKRTTTFMSSGMTLVESSPGRDITDTKWRCGGAHEAPPTTGILSLYNRGDR 246

Query: 236 RHFYVACPHCDHHQRLNWDRVT-WDKDEDGHHLPETARYICEECGTLWNDGERIAA---- 290
           R +Y  CPHC  + +   D +T +  + D     + AR +C  C  L    ++       
Sbjct: 247 RRWYWPCPHCGEYFQPVMDNMTGYRNNPDFVAAGQAARLMCPHCRGLIAPEQKRELNNQG 306

Query: 291 --IRTAEQVGAGWKASKPFRGH--ASYHLNELYSCFRRLRDIVQSFLDKK-------AAN 339
             +R  E+  A    +   R    AS+ +    + F+    ++   L  +       +  
Sbjct: 307 IWLREGERAAADGSITGTPRNSRIASFWMEGPAAAFQTWEQLIFKLLAAEEEYERTGSEE 366

Query: 340 DLQSFVNVSLAETW--EEQGEQADSHVLMQRAEEYP-DPVPAGGVVLTSGIDMQ---QDR 393
            L++ VN  +   +      EQ  S +L QRAE +P   VP G   + + +D+Q     R
Sbjct: 367 TLKAVVNTDIGRPYLPRSATEQRKSELLEQRAEPFPRRSVPDGVRFIEATVDVQGGKNRR 426

Query: 394 LEVETVAWGRGEESWSID-YTV------------LWGDPLR-DEVWQ-DLDDYLATTW-- 436
             V+   +G   E W +D Y +            L  DP    E W   L D    TW  
Sbjct: 427 FVVQITGYGEQGERWIVDRYNIRHSLRCSPNGESLPVDPAAYPEDWDLLLTDVFHKTWPL 486

Query: 437 KHESGAHLGIIAACLDTGGSTGYTQRAYEYARR----KTGRRLFAIKGVGGWDRPVVTAP 492
             +    + ++A  +DTGG  G T  AY + RR      G R+F  KG G     ++   
Sbjct: 487 ASDPDVRMRLMAMAVDTGGEAGVTDNAYRFWRRCRSDGLGNRVFLFKGDGLRRDRLINRT 546

Query: 493 SRKRTGRGQRK------VDLFSVGTDEAKLTVMRRLAVTEPGPGYTHIPADREAEWFH-Q 545
               TGR  R+      V L+ V TD  K  V   L    PGP Y H P D    WF+ +
Sbjct: 547 FPDNTGRSARRARASGDVALWLVQTDAFKDRVNNALWRDTPGPNYIHFP-DWLGRWFYDE 605

Query: 546 ITAEKLVTKYIKGVAKREWHQTRPRNEALDCRVYAYAALKIASPNIRRHAERLKAMSEDE 605
           +T E+      +G   +     R  NEA D  VYA A        +    E+++  S  +
Sbjct: 606 LTYEE------RGSDGKWRKPGRGANEAFDLLVYADALA------VLHGYEKIRWPSAPD 653

Query: 606 GKEPEKKPTKKRDKPEPVEEPLPAEGQKPKRKTRRRTSRSRKSWVNHW 653
             + E      +++      P    G + KR+ R++  R+ ++  N W
Sbjct: 654 WAQRETWLVFPQERSGETVSPELTAGAE-KRRRRKKKLRTERAEDNPW 700