Pairwise Alignments

Query, 653 a.a., phage terminase GpA from Marinobacter adhaerens HP15

Subject, 641 a.a., terminase from Escherichia coli ECRC100

 Score =  221 bits (563), Expect = 8e-62
 Identities = 185/629 (29%), Positives = 287/629 (45%), Gaps = 65/629 (10%)

Query: 26  LIPPAPLRPSQWAEENVRIAAGNAIPGPIRFANAPYQREPMDMATHPGCHRISLMWGAQV 85
           L  P P    +WA+ +  +   +A     R+   P+QR  M+         ++++  A+V
Sbjct: 22  LFRPEPQTAVEWADASYYLPKESAYQEG-RWETLPFQRAIMNAMGSDYIREVNVVKSARV 80

Query: 86  GKTQLALCVQGYFIAHEPKSQMMMQPSQGDLTTWLETKFNPMVDTNPVLQDLIAKPRSHE 145
           G +++ L V  YFI H+ ++ ++  P+ GD   +++T   P +   P L  L        
Sbjct: 81  GYSKMLLGVYAYFIEHKQRNTLIWLPTDGDAENFMKTHVEPTIRDIPSLLALAPWYGKKH 140

Query: 146 GVNNQRMKSYPGGFMMYAWAG-STKTMRGRSAPLIVADEIDGYGGTPEGDEVQLLWQRAA 204
             N   MK +  G   +   G + K  R +S  +   DE+  +       +  +  + + 
Sbjct: 141 RDNTLTMKRFTNGRGFWCLGGKAAKNYREKSVDVAGYDELAAF-------DEDIEQEGSP 193

Query: 205 TF-GDQRL-------LIEISTPTIKDESRIEAAFLQGDQ-RHFYVACPHCDHHQRLNW-D 254
           TF GD+R+        I  STP ++   +IE A  +      F+VACPHC   Q L + D
Sbjct: 194 TFLGDKRIEGSVWPKSIRGSTPKVRGTCQIERAASESPHFMRFHVACPHCGEEQYLKFGD 253

Query: 255 RVT-----WDKDEDGH--HLPE--------------TARYICEECGTLWNDGERIAAIRT 293
           + T     W  D+     +L E               ARYICE+ G    DG    +   
Sbjct: 254 KETPFGLKWTPDDPSSVFYLCEHNACVIRQQELDFTDARYICEKTGIWTRDGILWFS--- 310

Query: 294 AEQVGAGWKASKPFRGHASYHLNELYSCFRRLRDIVQSFLDKKA-ANDLQSFVNVSLAET 352
                +G +   P     ++H+   YS F     IV+ ++  K      ++FVN +L ET
Sbjct: 311 ----SSGEEIEPP--DSVTFHIWTAYSPFTTWVQIVKDWMKTKGDTGKRKTFVNTTLGET 364

Query: 353 WEEQ-GEQADSHVLMQRAEEYPDPVPAGGVVLTSGIDMQQDRLEVETVAWGRGEESWSID 411
           WE + GE+ D+ V+ +R E Y   VP     LT+GID Q DR E+    WG GEESW ID
Sbjct: 365 WEAKIGERPDAEVMAERKEHYSASVPDRVAYLTAGIDSQLDRYEMRVWGWGPGEESWLID 424

Query: 412 YTVLWGDPLRDEVWQDLDDYLATTWKHESGAHLGIIAACLDTGGSTGYTQRAYEYARRKT 471
             ++ G    ++    +D+ +  T+   +GA + +   C DTGG        YE +++  
Sbjct: 425 RQIIMGRHDDEQTLLRVDEAINKTYTRRNGAEMSVSRICWDTGGID--PTIVYERSKKHG 482

Query: 472 GRRLFAIKGVGGWDRPVVTAPSRKRTGRGQRKVDLFSVGTDEAKLTVMRRLAVT----EP 527
             R+  IKG   + +PV + P RKR   G   V L  +GTD AK  +  R  +T    EP
Sbjct: 483 LFRVIPIKGASVYGKPVASMP-RKRNKNG---VYLTEIGTDTAKEQIYNRFTLTPEGDEP 538

Query: 528 GPGYTHIPADR---EAEWFHQITAEKLVTKYIKGVAKREWHQTRPRNEALDCRVYAYAAL 584
            PG  H P +    +     Q+TAE+ V K++ G  K  W   + RNEALDC VYA AAL
Sbjct: 539 LPGAVHFPNNPDIFDLTEAQQLTAEEQVEKWVDGRKKILWDSKKRRNEALDCFVYALAAL 598

Query: 585 KIASPNIRRHAERLKA-MSEDEGKEPEKK 612
           +I+    +     L A + E++G    KK
Sbjct: 599 RISISRWQLDLSALLASLQEEDGAATNKK 627