Pairwise Alignments

Query, 323 a.a., D-alanine-D-alanine ligase from Marinobacter adhaerens HP15

Subject, 364 a.a., D-alanine--D-alanine ligase from Pseudomonas fluorescens SBW25

 Score =  163 bits (412), Expect = 7e-45
 Identities = 112/348 (32%), Positives = 173/348 (49%), Gaps = 49/348 (14%)

Query: 21  RVAVFMGGDSAEREVSLKSGKAVLAAL-------VSAGVDA---FAVDVRGCLLRTVDNP 70
           RV +  GG SAE EVSL+S + ++ AL       V  G+D    + ++     L   +NP
Sbjct: 5   RVGIIFGGRSAEHEVSLQSARNIVDALDRTRFEPVLIGIDKAGHWHLNDTSNFLLNQENP 64

Query: 71  DF---------------------------------DRVFIALHGRGGEDGTLQAILSQAG 97
                                              D +F  +HG  GEDG LQ +L  A 
Sbjct: 65  ALIALNQSNRELAVVPGKASQQLVETSGTGLLEHVDVIFPIVHGTLGEDGCLQGLLRMAD 124

Query: 98  IPYTGSDVLASALAMDKLRTKYVFEGCGLPTPKFRTMSGADQA----EQIIDELRAPLSV 153
           +P+ GSDVL SA+ MDK  +K +    G+    F T++ ++      +  ++ L  P+ V
Sbjct: 125 LPFVGSDVLGSAVCMDKDISKRLLRDAGIAVTPFITLTRSNATRTSFDTAVNTLGLPMFV 184

Query: 154 KPSREGSSIGIRKVHTAAELAHAYEAAAALDNLVLVEEWIEGPEFTVSLLQDRALPAIGL 213
           KP+ +GSS+G+ KV T AE   A E A   D  VLVE  ++G E   ++L +    A G 
Sbjct: 185 KPANQGSSVGVSKVGTEAEYHAAVELALGFDEKVLVESAVKGREIECAVLGNEHPIASGC 244

Query: 214 SAST-EHVFYDYEAKYLADDT-RYRIPCGLAPEDEVRLQHLALEAFRVVGCRTWGRVDIM 271
                   FY Y++KY+ D   +  +P  ++ +   R++ LA+EAF V+GC    RVD+ 
Sbjct: 245 GEIVVSSGFYSYDSKYIDDQAAQVVVPAAISHDASERIRGLAIEAFEVLGCSGLARVDVF 304

Query: 272 QDSDGKFWLLEVNTVPGMTDHSLVPMAAKAAGISFEELVVRILKDSLE 319
              DG   + E+N++PG T  S+ P   +AAG+S+ ELV R+++ +LE
Sbjct: 305 LTDDGNVLINEINSLPGFTRISMYPKLWQAAGMSYSELVSRLIELALE 352