Pairwise Alignments

Query, 323 a.a., D-alanine-D-alanine ligase from Marinobacter adhaerens HP15

Subject, 364 a.a., D-alanine--D-alanine ligase from Escherichia coli ECOR38

 Score =  159 bits (403), Expect = 8e-44
 Identities = 110/352 (31%), Positives = 178/352 (50%), Gaps = 57/352 (16%)

Query: 21  RVAVFMGGDSAEREVSLKSGKAVLAAL-------VSAGVDA----FAVDVRGCLLRTVDN 69
           RV +  GG SAE EVSL+S K ++ A+       V  G+D        D    LL   D 
Sbjct: 5   RVGIVFGGKSAEHEVSLQSAKNIVDAIDKSRFDVVLLGIDKQGQWHVSDASNYLLNADDP 64

Query: 70  --------------------------------PDFDRVFIALHGRGGEDGTLQAILSQAG 97
                                           P  D +F  +HG  GEDG+LQ +L  A 
Sbjct: 65  AHIALRPSATSLAQVPGKHEHQLIDAQNGQPLPTVDVIFPIVHGTLGEDGSLQGMLRVAN 124

Query: 98  IPYTGSDVLASALAMDKLRTKYVFEGCGLPTPKFRTMSGADQAE----QIIDELRAPLSV 153
           +P+ GSDVLASA  MDK  TK +    GL    F T++ A++      ++  +L  PL V
Sbjct: 125 LPFVGSDVLASAACMDKDVTKRLLRDAGLNIAPFITLTRANRHNISFAEVESKLGLPLFV 184

Query: 154 KPSREGSSIGIRKVHTAAELAHAYEAAAALDNLVLVEEWIEGPEFTVSLL-----QDRAL 208
           KP+ +GSS+G+ KV +  + A A + A   D+ V+VE+ I+G E   ++L     Q    
Sbjct: 185 KPANQGSSVGVSKVTSEEQYAIAVDLAFEFDHKVIVEQGIKGREIECAVLGNDNPQASTC 244

Query: 209 PAIGLSASTEHVFYDYEAKYLADD-TRYRIPCGLAPEDEVRLQHLALEAFRVVGCRTWGR 267
             I L++     FY Y+ KY+ +D  +  +P  +APE   +++ +A++A++ +GC    R
Sbjct: 245 GEIVLTSD----FYAYDTKYIDEDGAKVVVPAAIAPEINDKIRAIAVQAYQTLGCAGMAR 300

Query: 268 VDIMQDSDGKFWLLEVNTVPGMTDHSLVPMAAKAAGISFEELVVRILKDSLE 319
           VD+    + +  + E+NT+PG T+ S+ P   +A+G+ + +L+ R+++ +LE
Sbjct: 301 VDVFLTPENEVVINEINTLPGFTNISMYPKLWQASGLGYTDLITRLIELALE 352