Pairwise Alignments

Query, 352 a.a., lipopolysaccharide biosynthesis protein from Marinobacter adhaerens HP15

Subject, 326 a.a., lipopolysaccharide heptosyltransferase RfaC from Dickeya dianthicola 67-19

 Score = 71.2 bits (173), Expect = 3e-17
 Identities = 64/298 (21%), Positives = 135/298 (45%), Gaps = 25/298 (8%)

Query: 4   ICILRLSAIGDVTHVIPVVLSLQEQLPGVKITWVIGKIEAKLVGDLPGVEFII------- 56
           + I++ S++GDV H +P +    + + G++  WV+ +  A++ G  P V+ +I       
Sbjct: 3   VLIVKTSSMGDVLHTLPALTDAMQVIHGIQFDWVVEEGFAQIPGWHPAVDRVISVALRRW 62

Query: 57  ---FDKKAGRKGYAELRRQMSGRKFDALLHMQVAFRANLAAVCIPARVRIGYD-KARSKD 112
              +  +  R   A  ++Q+  R++DA++  Q   ++ +    +    + G D K+  + 
Sbjct: 63  RKSWFSRETRAERAAFKKQLRERRYDAVIDAQGLLKSAVLVTRLTLGNKHGLDWKSAREP 122

Query: 113 LHSLFINHRIKPAPKQHVRDCLASFLEPLDLKAAPPRWQIPLNDSDHEFAREQL----AN 168
           L S F  +R     +QH  + +       +L +    ++ P    D+  A   L    A+
Sbjct: 123 LASWFYQYRHPIGRQQHAVERIR------ELFSVSLNYRKPTEQGDYAIAARFLSAHPAD 176

Query: 169 DRKNLVISPCASHTLRNWPAERYAQLADHAIQKHGMKVILVGSPAPSEAEYCAAIEAAMK 228
            +  LV     +   ++W    + +L   A +  G+++ L   P  +E E+  A   A  
Sbjct: 177 SQPYLVFLHATTRDEKHWSEAHWRELIALA-EPRGLRIKL---PWGAEHEHQRAQRLAAG 232

Query: 229 EKAHNICGKDTLKQLTALMTHADLVVAPDTGPAHIASAVGTDVLGLFAASNPYRSGPY 286
               ++  + TL+Q+  ++  A  VV+ DTG +H+ +A+    + L+  ++P   G Y
Sbjct: 233 FSHVDVLPRLTLEQVAGVLAGAQAVVSVDTGLSHLTAALDRPNITLYGPTDPGLIGGY 290