Pairwise Alignments

Query, 257 a.a., spermidine/putrescine ABC transporter membrane protein from Marinobacter adhaerens HP15

Subject, 277 a.a., Inner membrane ABC transporter permease protein YdcV from Azospirillum sp. SherDot2

 Score =  210 bits (535), Expect = 2e-59
 Identities = 108/250 (43%), Positives = 161/250 (64%), Gaps = 7/250 (2%)

Query: 15  YLLLYVPIVVLVVFSFNESRTGYAWGGLSLRWYESLFNNRAMVTAMWNSLWLALSAATVS 74
           Y  LYVPI +LVVFSFNESR    W G S +WY  L +N A++ A + S  +A  +AT+S
Sbjct: 15  YAFLYVPIALLVVFSFNESRLVTVWSGFSTKWYAELLHNDALLDAAFLSFQVAAVSATLS 74

Query: 75  TVIGALTALALHRY-RFRGKKLLNGMLFVVMMSPEIVLAISLLALFLLVGLQLGY----- 128
            ++G    LAL R+ RFRG+ L  GM+   ++ PE++  +SLL LF+ +   LG+     
Sbjct: 75  VLLGTCAGLALTRFGRFRGRTLFGGMITAPLVMPEVITGLSLLLLFVAMEQWLGWPDGRG 134

Query: 129 -VSLLLAHVTFCLPFVVITVMARLSGFDESLPEAARDLGASDFTMTRTVLIPVIMPALLA 187
             ++ +AH TF + +V + + +RL+G D SL EAA DLGA    +   + +P+I PAL+A
Sbjct: 135 VTTITIAHTTFTMSYVAVVIQSRLAGMDGSLEEAAMDLGARPAKVFFVITLPLIAPALVA 194

Query: 188 GWLLGFTLSLDDVVVSTFVSGPSYEILPLRIYSMVRVGLKPEVNALGTLLLVFSLVMLML 247
           GWLL FTLSLDDVVV++FVSGP    LP+ I+S V+ G+ P++NAL TL+++     + +
Sbjct: 195 GWLLAFTLSLDDVVVASFVSGPGSTTLPMVIFSSVKFGISPQINALATLMVLVVATGIFV 254

Query: 248 SQWILIRSKR 257
           +  ++ R +R
Sbjct: 255 ASIVMARQER 264