Pairwise Alignments

Query, 538 a.a., methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor from Marinobacter adhaerens HP15

Subject, 521 a.a., chemotaxis protein from Pseudomonas simiae WCS417

 Score =  405 bits (1042), Expect = e-117
 Identities = 229/520 (44%), Positives = 324/520 (62%), Gaps = 2/520 (0%)

Query: 15  MRKNLPVTQREVKMRKGGRLITTTDLRGVITYCNEEFVEISGFSREELVGQAHNIIRHPD 74
           MR N PVTQRE+ +    +LI+ TD+RGVITYCN+ FV+ISGF R +L+G   NI+RHPD
Sbjct: 1   MRNNQPVTQREISLAPSQKLISATDVRGVITYCNDAFVDISGFERADLIGAPQNIVRHPD 60

Query: 75  MPQAVFKDMWDYLKAGKAWMGVVKNRAKSGDHYWVSAYVTPIRENGQMVGFESVRVEPTR 134
           +P AVF  MW  LK G  WMG+VKNR+K+GDHYWV+AYVTPI +  ++VGFESVRV+PT 
Sbjct: 61  VPPAVFAHMWGALKQGLPWMGIVKNRSKNGDHYWVNAYVTPIFDGSKVVGFESVRVKPTA 120

Query: 135 EQIARAERLYSKISAGKMTSSFSNRALSMLRSGWPFLVS-LVLSLGALKINQPWLAAGLI 193
           ++I RA+ LY +IS GK      +  L    +  P++ + L  SL  + ++ P   A  +
Sbjct: 121 DEIRRAQALYRRISQGKPGVPRQDAWLPAAINCVPYVATGLTGSLAGMFLSAPVAIAVAV 180

Query: 194 VMGHALGFGLVFNSLAARLRKLLDLRPDAFRDPIVARTYSDERGLFSQLSLLLVSEEARV 253
            +   +G         + LR L  + P    D ++A+ YSD RG  ++L    +S+ AR+
Sbjct: 181 AVAVPVGVLCSRWRQGSTLRLLHGVEPST-SDALIAQMYSDARGPQARLETAFLSQNARL 239

Query: 254 RTALARIDDQAELLYEQARASHGYISDGAAAIARQRAETDQTASAINEMTASIQEVAESV 313
           +T L R+ D AE L   A  S    S  +  + RQR ET+Q ++A+N+M A+ QEVA  V
Sbjct: 240 KTCLTRLQDSAEQLSALAGQSDQLASASSKGLDRQRVETEQVSAAVNQMAATTQEVASHV 299

Query: 314 TSNAREAEEANRLAGVGSDRSAEALVAIEELVTRVNGIGSTISKLGESTNSIGEAANLIS 373
              A   ++AN L G G + + +   AIE L   V+  G T+++L + +N IG   ++I 
Sbjct: 300 QRTADATQQANVLTGRGREVARDTREAIERLSAVVSETGVTVAQLAKDSNEIGSVVDVIK 359

Query: 374 EIAEQTNLLALNAAIEAARAGEQGRGFAVVADEVRSLARRTRESTVRIQNVIDDFRQQVD 433
            IA+QTNLLALNAAIEAARAGEQGRGFAVVADEVR LA+RT +ST +I  +I   +   +
Sbjct: 360 GIADQTNLLALNAAIEAARAGEQGRGFAVVADEVRQLAQRTSQSTTQIHGLITQLQASSN 419

Query: 434 SAVQATRDGEAVAGQGLEKVREAENSLRDIVTSIQTISDSFISMSAAFEEQSQVSDEINR 493
           +AVQ+  +G+  A +G+  V EA+ +L  I  ++  I+D    ++AA EEQS V++EI+R
Sbjct: 420 NAVQSMENGQRQAQEGVAWVLEADQALVGISEAVSHITDMTTQIAAATEEQSAVAEEISR 479

Query: 494 QITNIAELADHSDAQADSAKQSSDRLSAMSRGLKDLIARF 533
            IT IAELAD +  QA  +   S  L+  +     L+ RF
Sbjct: 480 NITTIAELADQTSLQAHQSTDLSKELTNTASTQYALVERF 519