Pairwise Alignments

Query, 765 a.a., Rad3-related DNA helicase from Marinobacter adhaerens HP15

Subject, 636 a.a., DinG family ATP-dependent helicase YoaA from Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868

 Score = 55.8 bits (133), Expect = 7e-12
 Identities = 146/636 (22%), Positives = 227/636 (35%), Gaps = 133/636 (20%)

Query: 183 FRPR--QRQLAETVYKNSVKSGTLLLEAPTGLGKTLGTLFPALMAMPA--------AGQD 232
           F+PR  QRQ+A  V +    +  L++EA TG GKT   L PAL A           A QD
Sbjct: 18  FKPREPQRQMAVAVTQAIENAQPLVVEAGTGTGKTYAYLAPALRAGKKVIISTGSKALQD 77

Query: 233 RLFYLTCRNTARQLAMDAVGRL--------------RSAQAAQHWPLRTLELVS------ 272
           +L+       A+ LA      L              + A A    P++TL  V       
Sbjct: 78  QLYSRDLPTVAKALAFTGKTALLKGRSNYLCLERLEQQALAGGDLPVQTLSDVILLRSWS 137

Query: 273 --------------KDDACEHP-----DKACHGDSCPLAKGFFDRLPDARAEAAQSEGTL 313
                          +D+   P     +  C G  CPL K  F  +  AR +A  ++  +
Sbjct: 138 NQTRDGDISTCVSVAEDSQAWPLVTSTNDNCLGSDCPLYKECF--VVKARKKAMDADVVI 195

Query: 314 DQHALAKIAAGHDICPYFLAQEMARWSDVVIGDVNRLFDQSALLHGLIRQNSWKASVLVD 373
             H L            FLA  + + S         L  Q+ ++             + D
Sbjct: 196 VNHHL------------FLADMVVKESGF-----GELIPQAEVM-------------IFD 225

Query: 374 EAHNLVDRGRGMYSVRLDQQRLLRIKKTAP----------KPLKSAIDRTARAWQSLIRD 423
           EAH L D     +   L  ++LL + K             + L+   DR A++ Q    D
Sbjct: 226 EAHQLPDIASQYFGQSLSSRQLLDLAKDITIAYRTELKDTQQLQKCADRLAQSAQ----D 281

Query: 424 CQADTQSPEFLETLPTQLLGALQAMVSNLTDYLADNPPDLA--------LQELLFESVAF 475
            +     P +   L   L  +       L D   +   D+A        L +  FE    
Sbjct: 282 FRLQLGEPGYRGNLRELLADSRIQRAFLLLDDTLELCYDVAKLSLGRSALLDAAFERATL 341

Query: 476 ----IKLADSFGDHSLCEFQRAGRGRASLTIQNLIPADFLRERFEAAHSVLLF-SATLSP 530
               +K            +        +L +  L  AD  +E  E      +F SATLS 
Sbjct: 342 YRSRLKRLKEINQPGYSYWYECTSRHFTLALTPLTVADKFKEVMEQKPGSWIFTSATLSV 401

Query: 531 GV---YYRDLLGLPEDSRFTSLPSPFSADQLRVQFTPGISTRQVHREASLKPIADLIARQ 587
                ++   LG+ E +    LPSPF   +  +   P  +  Q ++  + + +A ++   
Sbjct: 402 NDDLHHFTARLGI-EQAESMLLPSPFDYTRQALLCVPR-NLPQTNQPGAARQLAAMLRPI 459

Query: 588 FRDRPGHYLAFFSSFKYAKQASDALAEQ---APDIPQRAQQPGMSPQQRADFLAGFRNPE 644
                G      +S    +     LAEQ      +P   Q      Q    F++      
Sbjct: 460 IEANNGRCFMLCTSHAMMRD----LAEQFRATMTLPVLLQGETSKGQLLQQFVSAGN--- 512

Query: 645 GSVAFAVLGGVFSEGIDLPGDQLIGAFVATLGLPPFDAWHE-ILKVRLEK---RFGAGYD 700
              A  V    F EG+D+ GD L    +  L   PF +  + +LK R+E    R G  +D
Sbjct: 513 ---ALLVATSSFWEGVDVRGDTLSLVIIDKL---PFTSPDDPLLKARMEDCRLRGGDPFD 566

Query: 701 YTYLIPGLQKVAQAAGRVIRTPEDRGVIWLIDDRFL 736
              L   +  + Q  GR+IR  +DRGV+ + D+R +
Sbjct: 567 EVQLPDAVITLKQGVGRLIRDADDRGVLVICDNRLV 602