Pairwise Alignments

Query, 765 a.a., Rad3-related DNA helicase from Marinobacter adhaerens HP15

Subject, 636 a.a., putative ATP-dependent DNA helicase YoaA from Escherichia coli ECRC100

 Score = 55.5 bits (132), Expect = 9e-12
 Identities = 141/619 (22%), Positives = 226/619 (36%), Gaps = 95/619 (15%)

Query: 181 PAFRPR--QRQLAETVYKNSVKSGTLLLEAPTGLGKTLGTLFPALMAMPA--------AG 230
           P F+PR  QRQ+A  V +   K   L++EA TG GKT   L PAL A           A 
Sbjct: 16  PGFKPREPQRQMAVAVTQAIEKGQPLVVEAGTGTGKTYAYLAPALRAKKKVIISTGSKAL 75

Query: 231 QDRLFYLTCRNTARQLAMDAVGRLRSAQAAQHWPLRTLELVSKDDACEHPDKACHGDSCP 290
           QD+L+       ++ L       L   ++  +  L  LE            +A  G   P
Sbjct: 76  QDQLYSRDLPTVSKALKYTGNVALLKGRS-NYLCLERLE-----------QQALAGGDLP 123

Query: 291 --------LAKGFFDRLPDARAEAAQSEGTLDQHALAKIAAGHDIC-----PYFL----- 332
                   L + + ++  D       S    D  A   + + +D C     P +      
Sbjct: 124 VQILSDVILLRSWSNQTVDGDISTCVSVAE-DSQAWPLVTSTNDNCLGSDCPMYKDCFVV 182

Query: 333 -AQEMARWSDVVIGDVNRLFDQSALLHGLIRQNSWKASVLV-DEAHNLVDRGRGMYSVRL 390
            A++ A  +DVV+ + +       +      +   +A V++ DEAH L D     +   L
Sbjct: 183 KARKKAMDADVVVVNHHLFLADMVVKESGFGELIPEADVMIFDEAHQLPDIASQYFGQSL 242

Query: 391 DQQRLLRIKKTAP----------KPLKSAIDRTARAWQSLIRDCQADTQSPEFLETLPTQ 440
             ++LL + K             + L+   DR A++ Q    D +     P +   L   
Sbjct: 243 SSRQLLDLAKDITIAYRTELKDTQQLQKCADRLAQSAQ----DFRLQLGEPGYRGNLREL 298

Query: 441 LLGALQAMVSNLTDYLADNPPDLA--------LQELLFESVAF----IKLADSFGDHSLC 488
           L          L D   +   D+A        L +  FE        +K           
Sbjct: 299 LANPQIQRAFLLLDDTLELCYDVAKLSLGRSALLDAAFERATLYRTRLKRLKEINQPGYS 358

Query: 489 EFQRAGRGRASLTIQNLIPADFLRERFEAAHSVLLF-SATLSPGV---YYRDLLGLPEDS 544
            +        +L +  L  AD  +E         +F SATLS      ++   LG+ E +
Sbjct: 359 YWYECTSRHFTLALTPLSVADKFKELMAQKPGSWIFTSATLSVNDDLHHFTSRLGI-EQA 417

Query: 545 RFTSLPSPFSADQLRVQFTPGISTRQVHREASLKPIADLIARQFRDRPGHYLAFFSSFKY 604
               LPSPF   +  +   P  +  Q ++  S + +A ++        G      +S   
Sbjct: 418 ESLLLPSPFDYSRQALLCVPR-NLPQTNQPGSARQLAAMLRPIIEANNGRCFMLCTSHAM 476

Query: 605 AKQASDALAEQ---APDIPQRAQQPGMSPQQRADFLAGFRNPEGSVAFAVLGGVFSEGID 661
            +     LAEQ      +P   Q      Q    F++         A  V    F EG+D
Sbjct: 477 MRD----LAEQFRATMTLPVLLQGETSKGQLLQQFVSAGN------ALLVATSSFWEGVD 526

Query: 662 LPGDQLIGAFVATLGLPPFDAWHE-ILKVRLEK---RFGAGYDYTYLIPGLQKVAQAAGR 717
           + GD L    +  L   PF +  + +LK R+E    R G  +D   L   +  + Q  GR
Sbjct: 527 VRGDTLSLVIIDKL---PFTSPDDPLLKARMEDCRLRGGDPFDEVQLPDAVITLKQGVGR 583

Query: 718 VIRTPEDRGVIWLIDDRFL 736
           +IR  +DRGV+ + D+R +
Sbjct: 584 LIRDADDRGVLVICDNRLV 602