Pairwise Alignments

Query, 68 a.a., cold shock, CspA from Marinobacter adhaerens HP15

Subject, 69 a.a., constitutive cold shock family transcription antitermination protein; negative regulator of cspA transcription; RNA melting protein; ssDNA-binding protein from Escherichia coli BL21

 Score = 96.3 bits (238), Expect = 4e-26
 Identities = 49/69 (71%), Positives = 54/69 (78%), Gaps = 1/69 (1%)

Query: 1  MSTITGNVKFFNEAKGFGFITREGGA-DVFVHYSNIQGGGFKTLAEGQEVEFTVTQGQKG 59
          MS I GNVK+FNE+KGFGFIT E G+ DVFVH+S IQ  GFKTLAEGQ VEF +T G KG
Sbjct: 1  MSKIKGNVKWFNESKGFGFITPEDGSKDVFVHFSAIQTNGFKTLAEGQRVEFEITNGAKG 60

Query: 60 PQAENVIGL 68
          P A NVI L
Sbjct: 61 PSAANVIAL 69