Pairwise Alignments

Query, 321 a.a., TRAP dicarboxylate transporter- DctP subunit from Marinobacter adhaerens HP15

Subject, 320 a.a., TRAP transporter substrate-binding protein from Pseudomonas fluorescens SBW25

 Score = 79.7 bits (195), Expect = 9e-20
 Identities = 65/263 (24%), Positives = 115/263 (43%), Gaps = 14/263 (5%)

Query: 34  ANLPTQIAY-GFAEDIKNGTDGDLTITVHSGASLVKHPEIPRAVRTGQVQLGEIFIGIMG 92
           A  PT +A     + +   ++G+LT     G  L    E+    + G VQ+  + +GI+G
Sbjct: 32  AGYPTVVAEENMGKALTKESNGELTFKYFPGGVLGSEKEVVEQAQVGAVQMTRVSLGIVG 91

Query: 93  NTHPVFKHDNIPFLATSFEDAKRLWEAAKPQIEKQL------DKEGMTLLYTVPWPAQSL 146
              P     N+PF+   F D   + +    +I  ++       + G+  L  +    ++L
Sbjct: 92  PVVPDVNVFNLPFV---FRDQAHMRKVIDGEIGDEILAKITNSEFGLVALAWMDGGTRNL 148

Query: 147 YTKAPVNTLEDLQGLKMRAY-SPSTSRLADLMNTTPTTVQVPEIPQAFSTGIIDAMITSP 205
           YTK PV  +EDL+G+K+R   +P      + M      +   EI  A  TG+ID    +P
Sbjct: 149 YTKKPVRKIEDLKGMKIRVQGNPLFIDAFNAMGANGIAMDTGEIFSALQTGVIDGAENNP 208

Query: 206 STGANGQAWDYLSHYTDIKAWIPKNVVVVNKRAFRRLSDEQRQVILDAAAAAEAKG---W 262
            T      +    +YT  +  I    +V++K  + +L+  Q+ ++  AA AA+A     W
Sbjct: 209 PTLLEHNHFQNAKYYTLTEHLILPEPIVMSKITWNKLTPAQQDMVKKAAKAAQADERVLW 268

Query: 263 EGVRKTAAEDTATLAENGITVSE 285
           +    ++ E         ITV +
Sbjct: 269 DAKSASSEEKLKKAGVEFITVDK 291