Pairwise Alignments

Query, 332 a.a., flagellar motor switch protein FliM-like protein from Marinobacter adhaerens HP15

Subject, 334 a.a., Flagellar motor switch protein FliM from Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868

 Score =  234 bits (596), Expect = 3e-66
 Identities = 126/317 (39%), Positives = 190/317 (59%), Gaps = 11/317 (3%)

Query: 4   LLSQDEIDALLHGVDDGDIDTYEE-----TDDTGIKSYDLASQDRIVRGRMPTLEMINER 58
           +LSQ EIDALL+G    D DT +E       D+ I+ YD  +Q R+VR R+  LE+INER
Sbjct: 5   ILSQAEIDALLNG----DSDTKDEPTPGIASDSDIRPYDPNTQRRVVRERLQALEIINER 60

Query: 59  FARYTRISLFNLMRRNADVSTGGVQIMKFGEYIHTLYVPTSLNLCKVRPLRGTSLFVLDA 118
           FAR  R+ LFNL+RR+ D++ G ++I  + E+   L VPT+LNL  ++PLRGT L V   
Sbjct: 61  FARQFRMGLFNLLRRSPDITVGAIRIQPYHEFARNLPVPTNLNLIHLKPLRGTGLVVFSP 120

Query: 119 KLVFKLVDNFFGGEGRH-AKIEGREFTPTETRIVQMVLDQVFHDMKEAWHAVLKVDFEYL 177
            LVF  VDN FGG+GR   K+EGREFT TE R++  +L        +AW A+  ++ EY+
Sbjct: 121 SLVFIAVDNLFGGDGRFPTKVEGREFTHTEQRVINRMLKLALEGYSDAWKAINPLEVEYV 180

Query: 178 SSEVNPAMANI-VSPSEVVVVSTFHIELDGGGGELHFALPYSMIEPIRDVLDAGVQSDID 236
            SE+     NI  SP+++VV + FH+E+    GE +  LP+SMIEP+R++L      +  
Sbjct: 181 RSEMQVKFTNITTSPNDIVVNTPFHVEIGNLTGEFNICLPFSMIEPLRELLVNPPLENSR 240

Query: 237 DVDERWVNALQEDIKEVSVPINTTVCRRRISLRDIAKMKAGDIIPVEIPEHLTVTANGIP 296
             D+ W + L   ++   + +        + L  I K+K GD++P+E P+ +    +G+P
Sbjct: 241 HEDQNWRDNLVRQVQHSELELVANFADIPLRLSQILKLKPGDVLPIEKPDRIIAHVDGVP 300

Query: 297 IYKATLGTRDGKLALRI 313
           +  +  GT +G+ ALR+
Sbjct: 301 VLTSQYGTVNGQYALRV 317