Pairwise Alignments

Query, 347 a.a., glutamate/glutamine/aspartate/asparagine ABC transporter, periplasmic substrate-binding protein from Marinobacter adhaerens HP15

Subject, 277 a.a., ABC transporter, substrate-binding protein (cluster 3, basic aa/glutamine/opines) from Variovorax sp. SCN45

 Score = 96.7 bits (239), Expect = 6e-25
 Identities = 72/260 (27%), Positives = 123/260 (47%), Gaps = 12/260 (4%)

Query: 7   MRKTKSIALGIALAVGTFSATGAMAATTLENVKEKGHLQCGVTSGLPGFSQPDEKGN-WT 65
           M + K I   +ALA+G+F+  GA  A  L++V++ G L+     G P F   D       
Sbjct: 1   MSRNKFIVTSLALAIGSFTLGGAAWADRLDDVRKAGVLRVAAFDGNPPFGYIDPASKKQV 60

Query: 66  GIDVDTCRAVAAAIFGDANAVEFTPLTAKERFTALQSGEIDMLSRNTTWTLTRDASLGLN 125
           G D+D     A ++      +E  P     R   L SG++D++    ++T+T + +  ++
Sbjct: 61  GHDIDLATEFAKSL---GVKIELVPTNPANRIPLLTSGKVDVVF--ASFTITDERAKAVD 115

Query: 126 FAGVNYYDGQGFLINKGIGVDDATQLDGATICIQAGTTTELNLSDYFRAKGMEFKPIVFD 185
           F    +  GQ FL  KG+ + DA Q+    I  + GTT E NL    R    + K +++D
Sbjct: 116 FTTPYFLVGQQFLAKKGV-LKDAAQIKDIRIGTEKGTTMESNL----RKNYPDAKVVLYD 170

Query: 186 TSEQTVQGFAAGRCDVLTSDRSQLAALRSKLSDPSSAKILPNTISKEPLGPVVRQGDDQW 245
            S   +     G    +T+D  +L A  + + D    +I P T+SKE LG  V +G+ + 
Sbjct: 171 DSPFALAALRNGNVQAITNDGVKLTAQWNAIPDKEKYEIPPITVSKEYLGAAVPKGEARL 230

Query: 246 FNIVK-WVLFAQINAEELGV 264
              +  W++ ++ N   L +
Sbjct: 231 LEALNTWLVDSEKNGRALAI 250