Pairwise Alignments

Query, 626 a.a., sigma-54 dependent transcriptional regulator from Marinobacter adhaerens HP15

Subject, 641 a.a., Transcriptional activator of acetoin dehydrogenase operon AcoR from Variovorax sp. SCN45

 Score =  300 bits (768), Expect = 1e-85
 Identities = 210/641 (32%), Positives = 325/641 (50%), Gaps = 56/641 (8%)

Query: 10  RSVIADSWNRCIAWGLDHDHEPAPLKPEPARL---EEINRQHSEL---LSVTEAEVLPYY 63
           +S++  SW RC+      DH   P KP PAR+   +E+     +L   L    A +   Y
Sbjct: 26  QSLVHKSWARCV-----RDHGLDPSKPTPARILPAQEVRAHQQQLEHFLRAARAGMEDIY 80

Query: 64  RNVLSNSRCLILLADQHATVLSSWGDERITETRLKPWFQTGANWQEQNCGTNAIGTSIAV 123
           R V ++   ++LL D     +   G+    +   K     GA+W E + GT  +GT +  
Sbjct: 81  RRV-ADLGYMVLLTDAEGITVDYIGNPAWDDQLRKAGLYLGADWNEAHAGTCGVGTCLVE 139

Query: 124 GGPVQIQRNEHFLKTNRSIIGSAAPIFDAHRQIAGVLSVFS----DAYLPQAHTLGMVRL 179
             P+   + EHF  T+ ++  + AP+FD   ++  +L V +    +A   Q     +V +
Sbjct: 140 RQPMTCHQTEHFDATHIALTCTTAPLFDHSGKLTAILDVSALRSPEAKESQHLVRHLVSM 199

Query: 180 LSQSVENRLINRQFGPDHFQITLNTTADNFDSPWSGILVCDDSGQVIASNQRADQLLGMN 239
            ++ +E+    R F   H+ + L +     D     +L  DD G +  +N  A Q    +
Sbjct: 200 YARMIEDADFLRNFR-GHWILRLGSAFGLVDVAGEVMLAFDDGGTLAGANGGARQAFAGH 258

Query: 240 TVEARLDELFTRHRNHI--LGH--------PETETLQLTTRSKVRLSARIKRPTRIPDAN 289
            +   + EL     + I  +G+        P   T+ L    +   S    R  R     
Sbjct: 259 ALSGAVSELLHMPMDAIWRIGNGGAISPLMPFAHTVLLPGGGEYHASLIAPRSRR----- 313

Query: 290 GKTKPSPVPEDLRQSARPLD----IDNLDYGDSAVKRCATQSLKVLERGLPVLITGETGV 345
                +  P     SARP D    ++ +   D A+++   Q+ ++++RG+ VL+ GETG 
Sbjct: 314 -----AQAPATAAPSARPSDRLPPLERIAGDDPAMQKLLAQARRLVDRGIHVLVEGETGS 368

Query: 346 GKEVLVKALHRASHRKDQPLVAVNCAAIPPELVESELFGYEAGAFTGARAQGSLGFIRKA 405
           GKEVL +ALH AS R   P VAVNCAAIP  L+ESELFGY  G+FTG RA+G  G I +A
Sbjct: 369 GKEVLARALHSASSRAAMPFVAVNCAAIPDSLIESELFGYTPGSFTGGRAKGMKGLIAQA 428

Query: 406 HKGVLFLDEIGEMPLSAQSRLLRVLQERVVTPVGSTDSVPVDILLVTATNRPLTTRIENG 465
            +G LFLDEIG+MP++ Q+RLLRVL E  V P+G+     VDI +V AT+R L   + +G
Sbjct: 429 DRGTLFLDEIGDMPMALQTRLLRVLSEGEVLPLGAESPQRVDIAVVAATHRHLPGLVASG 488

Query: 466 HFRADLYYRINGLCVELPALRNRADRRMLIQSLYARHRDPGQS-EQLSPKVLSALEAHPW 524
            FR DLYYR+ G  ++LP LR R D R LI+ ++        S  +LS + +  L AH W
Sbjct: 489 RFREDLYYRLCGAVLKLPPLRARGDMRYLIEGMFNEEAAAMPSPARLSEEAMQRLLAHDW 548

Query: 525 PGNIRQLVNVLRVAIAIADGEQVQVWHLPEDFLAEFEANPLEQSDPPMQEQPVAGSEAET 584
           PGN+R+L N LR+A+A+  G  V      +D   +  A+ +  ++P   ++ VA +EA  
Sbjct: 549 PGNLRELRNALRLALALCTGASVSA----QDLQLQARADTVCDTEP---DEDVA-AEAR- 599

Query: 585 EDTLARTLQIYRKCTGNISQAARELSISRNTLYKRLREMGV 625
                R L   ++    ++ AA EL +SR T Y+ ++ +G+
Sbjct: 600 -----RLLDALKRHRWRVAHAADELGMSRATAYRHMKRLGI 635