Pairwise Alignments

Query, 269 a.a., sugar ABC transporter, permease protein from Marinobacter adhaerens HP15

Subject, 278 a.a., ABC transporter, membrane spanning protein (sugar) from Agrobacterium fabrum C58

 Score =  128 bits (321), Expect = 2e-34
 Identities = 76/276 (27%), Positives = 136/276 (49%), Gaps = 12/276 (4%)

Query: 1   MMRQTRSKNVGITLFILLLLTPIY----WLLNMSFKTNQEILGGL---TLWPQNFTLDNY 53
           ++++     +G+    L++++P+     W++++S K   EI  G     L P+ F   NY
Sbjct: 5   ILKRKNLDRIGLFFVALVMISPVILFFIWMISLSLK--YEIDNGAYPPILIPERFAWSNY 62

Query: 54  AVIFTDPSWYNGYINSMIYVSINVVITLLVALPAAYAFSRYKFLGDKHLFFWLLSNRMAP 113
             +F + S++  + NS++      ++ L++ +PA Y  +R K   +K     +++ RM P
Sbjct: 63  VKVFEENSFFLYFWNSVLVTGAATILALVIGVPAGYGIARLK--AEKSAVVIMIA-RMTP 119

Query: 114 PAVFLLPFFQLYSSIGLFDTHIAVALAHCLFNVPLAVWILEGFMSGVPREYDEMAYIDGY 173
              FL+P F L+  + L  T     + H +  VP+ VWI+ G+    P+E +E A IDG 
Sbjct: 120 GLSFLIPLFLLFQWLNLLGTLWPQIIIHLVVTVPIVVWIMIGYFETTPKELEEAASIDGA 179

Query: 174 SFPKFFVKVFLPMIRSGIGVTAFFAFMFSWVELLLARTLTSVDAQPIGAIMTRTIGASGI 233
           S  + F  V LP+ + GI V+   A +FSW   +    L S + + +   +   +    +
Sbjct: 180 SSWQVFRLVALPIAKPGIVVSFILAVIFSWNNFVFGIVLASRETRTLPVAVYNMLSFEQV 239

Query: 234 DWGVLAAAGSLTIIPGLLVIWFVRNHVAKGFALGRV 269
            WG LAAA  +  +P LL+  F +  +  G   G V
Sbjct: 240 SWGPLAAAALIVTLPVLLLTMFAQKQIVAGLTAGAV 275