Pairwise Alignments

Query, 296 a.a., cytochrome c oxidase, cbb3-type, subunit III from Marinobacter adhaerens HP15

Subject, 313 a.a., cytochrome c oxidase subunit, cbb3-type from Pseudomonas putida KT2440

 Score =  329 bits (844), Expect = 4e-95
 Identities = 158/305 (51%), Positives = 220/305 (72%), Gaps = 13/305 (4%)

Query: 1   MSTFWSIWISVITLGTVFGCWWLLWATRKSQTSDTETDRTMGHSFDGIEEYDNPLPKWWF 60
           M+TFWS +ISV+T+G++ G  WLL ATRK Q+++T TD TMGHSFDGIEEYDNPLPKWWF
Sbjct: 1   MTTFWSTYISVLTIGSLIGLTWLLLATRKGQSNNT-TDETMGHSFDGIEEYDNPLPKWWF 59

Query: 61  YLFLATCVFALGYLALYPGLGSFKGLL-----GWTSTNQWEAEVAEAEEKYGPIYAQYGQ 115
           +LF+ T  F++GYL LYPGLG++KG+L     GWT  N+W+ E+ +A+ ++GPI+A+Y  
Sbjct: 60  WLFVGTLAFSVGYLILYPGLGNWKGILPGYENGWTGANEWQKEMDKADARFGPIFAKYAA 119

Query: 116 TPVPELAENSDAMKIGQRLFANNCAVCHGSAARGQVGFPNLTDDDWLYGGTPEAILSTLH 175
            PV E+A++  A+K+G RLFA+NC+VCHGS A+G  GFPNLTD+DW +GG PE I +++ 
Sbjct: 120 MPVEEVAKDPQALKMGSRLFASNCSVCHGSDAKGAFGFPNLTDNDWRWGGDPETIKTSIM 179

Query: 176 NGRMGAMPAMGTMPNMTSEQVDQVVNYVLSFSGREKDADAAKA----GEQVFAQACVACH 231
           +GR G MPA   +  +  + V  V  +V+S        + AKA    G+++FA  CVACH
Sbjct: 180 SGRHGVMPAWAEV--IGDQGVADVAAFVVSKLDGRTLPEGAKADVENGQKIFAANCVACH 237

Query: 232 GADGKGNQAIGAPNLT-DNTWLYGSTYEWIKETVVNGRQNMMPAQDRLLSGDQIQILAAY 290
           G +GKG  A+GAPNLT    ++YGS++  +++T+  GRQ  MPAQ  +   D++ +LAAY
Sbjct: 238 GPEGKGTPAMGAPNLTHPQAFIYGSSFAQLQQTIRYGRQGQMPAQAEIQGNDKVHLLAAY 297

Query: 291 VYSLS 295
           VYSLS
Sbjct: 298 VYSLS 302



 Score = 52.4 bits (124), Expect = 1e-11
 Identities = 32/91 (35%), Positives = 49/91 (53%), Gaps = 6/91 (6%)

Query: 131 GQRLFANNCAVCHGSAARGQ--VGFPNLTDDD-WLYGGTPEAILSTLHNGRMGAMPAMGT 187
           GQ++FA NC  CHG   +G   +G PNLT    ++YG +   +  T+  GR G MPA   
Sbjct: 225 GQKIFAANCVACHGPEGKGTPAMGAPNLTHPQAFIYGSSFAQLQQTIRYGRQGQMPAQAE 284

Query: 188 MPNMTSEQVDQVVNYVLSFSGREKDADAAKA 218
           +    +++V  +  YV S S ++  A+A  A
Sbjct: 285 IQG--NDKVHLLAAYVYSLS-QDGSAEAVTA 312