Pairwise Alignments

Query, 392 a.a., two component, sigma54 specific, transcriptional regulator, Fis family from Marinobacter adhaerens HP15

Subject, 478 a.a., nitrogen regulation protein NR(I) from Pseudomonas fluorescens SBW25

 Score =  294 bits (752), Expect = 4e-84
 Identities = 161/396 (40%), Positives = 257/396 (64%), Gaps = 12/396 (3%)

Query: 2   RTPTVLIIDDEKNLVSSLMFSLEEEGMTVFAAYDGKSG-LTEIEKRTPDVVLLDLKLPDQ 60
           R+ TV I+DD++++   L  +L++EGMT   ++D   G ++ + ++ PDV++ D+++P  
Sbjct: 3   RSETVWIVDDDRSIRWVLEKALQQEGMTT-QSFDSADGVMSRLARQQPDVIISDIRMPGA 61

Query: 61  SGFEVLDQVQAL-PAPPITIMISAHGDTRAAVEAVKKGAQDYITKPFDLDELILLIQRNH 119
           SG ++L +++   P  P+ IM +AH D  +AV + + GA +Y+ KPFD+DE + L++R +
Sbjct: 62  SGLDLLARIREQHPRLPVIIM-TAHSDLDSAVASYQGGAFEYLPKPFDVDEAVALVKRAN 120

Query: 120 KH--RQLTEEVAYRREREADVHGLVGHSSAMRKLLDQVERIGKSSARTVLLQGPSGSGKT 177
           +H   Q  +E      R  ++   +G + AM+++   + R+  S+  TVL+ G SG+GK 
Sbjct: 121 QHAQEQQNQEAPPALTRTPEI---IGEAPAMQEVFRAIGRLSHSNI-TVLINGESGTGKE 176

Query: 178 LIAKALHATKDRAA-PFVSVNCASLPENLLEAELFGAEKGAYTGADKRRTGLVELANGGT 236
           L+A ALH    RAA PF+++N A++P++L+E+ELFG EKGA+TGA   R G  E A+GGT
Sbjct: 177 LVAHALHRHSPRAASPFIALNMAAIPKDLMESELFGHEKGAFTGAANLRRGRFEQADGGT 236

Query: 237 LFLDEIGELPLPLQAKLLTFLETHRFRAVGGQKEIEADLRVIAASNRDLQTEAQTGAFRE 296
           LFLDEIG++P   Q +LL  L    F  VGG   ++ D+R+IAA++++L+T    G FRE
Sbjct: 237 LFLDEIGDMPADTQTRLLRVLADGEFYRVGGHTPVKVDVRIIAATHQNLETLVHAGKFRE 296

Query: 297 DLFYRLNVMPLTIPSLAERRDDIPMLASNFATGLAAQEGCRPINLSSETLTTLCNYDWPG 356
           DLF+RLNV+ + IP +++RR+DIP LA +F +  A +    P  L SET   L N  WPG
Sbjct: 297 DLFHRLNVIRIHIPRMSDRREDIPTLARHFLSRAAQELAVEPKLLKSETEEYLKNLPWPG 356

Query: 357 NIRELRNTIERLTILHAGESINVDQLPPEITKSAPQ 392
           N+R+L NT   +T++ +G  +++  LPPE+  S PQ
Sbjct: 357 NVRQLENTCRWITVMASGREVHISDLPPELL-SLPQ 391