Pairwise Alignments

Query, 392 a.a., two component, sigma54 specific, transcriptional regulator, Fis family from Marinobacter adhaerens HP15

Subject, 469 a.a., DNA-binding transcriptional regulator NtrC from Escherichia coli HS(pFamp)R (ATCC 700891)

 Score =  288 bits (738), Expect = 2e-82
 Identities = 162/395 (41%), Positives = 246/395 (62%), Gaps = 13/395 (3%)

Query: 1   MRTPTVLIIDDEKNLVSSLMFSLEEEGMTVFAAYDGKSGLTEIEKRTPDVVLLDLKLPDQ 60
           M+   V ++DD+ ++   L  +L   G+T     +G   L  +  +TPDV+L D+++P  
Sbjct: 1   MQRGIVWVVDDDSSIRWVLERALAGAGLTCTTFENGAEVLEALASKTPDVLLSDIRMPGM 60

Query: 61  SGFEVLDQV-QALPAPPITIMISAHGDTRAAVEAVKKGAQDYITKPFDLDELILLIQRNH 119
            G  +L Q+ Q  P  P+ IM +AH D  AAV A ++GA DY+ KPFD+DE + L++R  
Sbjct: 61  DGLALLKQIKQRHPMLPVIIM-TAHSDLDAAVSAYQQGAFDYLPKPFDIDEAVALVERAI 119

Query: 120 KHRQLTEEVAYRREREADVHG----LVGHSSAMRKLLDQVERIGKSSARTVLLQGPSGSG 175
            H Q  ++      R   ++G    ++G + AM+ +   + R+ +SS  +VL+ G SG+G
Sbjct: 120 SHYQEQQQ-----PRNIQLNGPTTDIIGEAPAMQDVFRIIGRLSRSSI-SVLINGESGTG 173

Query: 176 KTLIAKALHATKDRA-APFVSVNCASLPENLLEAELFGAEKGAYTGADKRRTGLVELANG 234
           K L+A ALH    RA APF+++N A++P++L+E+ELFG EKGA+TGA+  R G  E A+G
Sbjct: 174 KELVAHALHRHSPRAKAPFIALNMAAIPKDLIESELFGHEKGAFTGANTIRQGRFEQADG 233

Query: 235 GTLFLDEIGELPLPLQAKLLTFLETHRFRAVGGQKEIEADLRVIAASNRDLQTEAQTGAF 294
           GTLFLDEIG++PL +Q +LL  L   +F  VGG   ++ D+R+IAA++++L+   Q G F
Sbjct: 234 GTLFLDEIGDMPLDVQTRLLRVLADGQFYRVGGYAPVKVDVRIIAATHQNLEQRVQEGKF 293

Query: 295 REDLFYRLNVMPLTIPSLAERRDDIPMLASNFATGLAAQEGCRPINLSSETLTTLCNYDW 354
           REDLF+RLNV+ + +P L ERR+DIP LA +F    A + G     L  ET   L    W
Sbjct: 294 REDLFHRLNVIRVHLPPLRERREDIPRLARHFLQVAAHELGVEAKLLHPETEAALTRLAW 353

Query: 355 PGNIRELRNTIERLTILHAGESINVDQLPPEITKS 389
           PGN+R+L NT   LT++ AG+ + +  LP E+ +S
Sbjct: 354 PGNVRQLENTCRWLTVMAAGQEVLIQDLPGELFES 388