Pairwise Alignments

Query, 392 a.a., two component, sigma54 specific, transcriptional regulator, Fis family from Marinobacter adhaerens HP15

Subject, 441 a.a., Transcriptional regulatory protein ZraR from Escherichia coli HS(pFamp)R (ATCC 700891)

 Score =  290 bits (743), Expect = 4e-83
 Identities = 160/380 (42%), Positives = 237/380 (62%), Gaps = 6/380 (1%)

Query: 6   VLIIDDEKNLVSSLMFSLEEEGMTVFAAYDGKSGLTEIEKRTPDVVLLDLKLPDQSGFEV 65
           +L++DD+ +  + L   L   G  V  A  G+  L ++ ++  D+VL D+++ +  G   
Sbjct: 8   ILVVDDDISHCTILQALLRGWGYNVALANSGRQALEQVREQVFDLVLCDVRMAEMDGIAT 67

Query: 66  LDQVQAL-PAPPITIMISAHGDTRAAVEAVKKGAQDYITKPFDLDELILLIQRNHKHRQL 124
           L +++AL PA P+ IM +A+     AVEA+K GA DY+ KP D D L   +++   H   
Sbjct: 68  LKEIKALNPAIPVLIM-TAYSSVETAVEALKTGALDYLIKPLDFDNLQATLEKALAHTHS 126

Query: 125 TEEVAYRREREADVHGLVGHSSAMRKLLDQVERIGKSSARTVLLQGPSGSGKTLIAKALH 184
            +  A      A   G+VG SSAM+ LL ++  +  S A TVL+ G SG+GK L+A+A+H
Sbjct: 127 ID--AETPAVTASQFGMVGKSSAMQHLLSEIALVAPSEA-TVLIHGDSGTGKELVARAIH 183

Query: 185 ATKDRAA-PFVSVNCASLPENLLEAELFGAEKGAYTGADKRRTGLVELANGGTLFLDEIG 243
           A+  R+  P V++NCA+L E+LLE+ELFG EKGA+TGADKRR G    A+GGTLFLDEIG
Sbjct: 184 ASSARSEKPLVTLNCAALNESLLESELFGHEKGAFTGADKRREGRFVEADGGTLFLDEIG 243

Query: 244 ELPLPLQAKLLTFLETHRFRAVGGQKEIEADLRVIAASNRDLQTEAQTGAFREDLFYRLN 303
           ++   +Q +LL  ++    + VG  + I  D+R+IAA++RDL  E   G FR+DL+YRLN
Sbjct: 244 DISPMMQVRLLRAIQEREVQRVGSNQTISVDVRLIAATHRDLAAEVNAGHFRQDLYYRLN 303

Query: 304 VMPLTIPSLAERRDDIPMLASNFATGLAAQEGCRPINLSSETLTTLCNYDWPGNIRELRN 363
           V+ + +PSL +RR+DIP+LA +F    A +        + + +  L +YDWPGNIREL N
Sbjct: 304 VVAIEVPSLRQRREDIPLLAGHFLQRFAERNRKAVKGFTPQAMDLLIHYDWPGNIRELEN 363

Query: 364 TIERLTILHAGESINVDQLP 383
            +ER  +L  GE I+  +LP
Sbjct: 364 AVERAVVLLTGEYISERELP 383