Pairwise Alignments

Query, 620 a.a., excinuclease ABC subunit C from Marinobacter adhaerens HP15

Subject, 642 a.a., excinuclease ABC chain C from Agrobacterium fabrum C58

 Score =  460 bits (1183), Expect = e-133
 Identities = 260/624 (41%), Positives = 371/624 (59%), Gaps = 31/624 (4%)

Query: 20  FLKQLTERPGVYRMYDEGGSVLYVGKARNLKKRVGSYFRKTGLAPKTEALVGKIASIEVT 79
           F+K L   PGVYRM++E G VLYVGKAR+LKKRVG+Y +    + +   +V     +E  
Sbjct: 22  FVKHLPNSPGVYRMFNEAGDVLYVGKARSLKKRVGNYAQGRVHSNRIAQMVRFTTHMEFV 81

Query: 80  ITGSETEALLLEQNLIKSLRPPYNILLRDDKSYPYIYLSSHSDYPSLTFRRG-RTKKGGG 138
            T +ETEALLLE NLIK LRP +N+LLRDDKS+PYI +++ +  P++   RG R +KG  
Sbjct: 82  TTRTETEALLLEANLIKRLRPRFNVLLRDDKSFPYILITADNRAPAIFKHRGARARKGD- 140

Query: 139 TWFGPFPSSGAVKESLNVLQKIFRIRNCSESFFRNRTRPCLQYQINRCTAPCVEYITPEE 198
            +FGPF S+GAV  ++N LQ+ F IR C++S F  RTRPCL YQI RC+ PC   ++ E 
Sbjct: 141 -YFGPFASAGAVGRTINSLQRAFLIRTCTDSVFETRTRPCLLYQIKRCSGPCTHEVSDEG 199

Query: 199 YQQDIRHATMFLEGKNPAILHDLMNAMEAASKNLEFEKAAAYRDQINHLRHVQEQQSVDG 258
           Y + ++ A  FL GK+ A+   +   M  AS++L+FE+AA YRD++  L HVQ  Q ++ 
Sbjct: 200 YAELVKEAKDFLSGKSQAVKTAIARQMNEASEDLDFERAAIYRDRLAALSHVQSHQGINP 259

Query: 259 EG-GDADVIAIAQDAGIVCIVVIIVRGGRVLGTKDYFPRYSIEQTEGELLSAFLGQYYFG 317
            G  +ADV AI  + GI CI V   R G+  G + YFP+        E+L+AFL Q+Y  
Sbjct: 260 AGIEEADVFAIHHEGGISCIQVFFFRTGQNWGNRAYFPKADPSLPGSEILNAFLAQFY-- 317

Query: 318 GNTRREIPRDILVPVEVEGQELLAQALSESANRETRIRGNVRGERRRWLELAMTNARQTL 377
               + +P+ IL+   VE QELLA AL E A  +  I    RGE++   +  + NAR+  
Sbjct: 318 --DDKPVPKQILLSETVEEQELLAAALGEKAGHKVTISVPQRGEKKDITDHVLANAREAH 375

Query: 378 LTHLASKETVYRRLLALRDLLELSETPSRMECFDISHSHGENTVASCVVFDENGPLKSDY 437
              LA   +  R L    +   L   P R+E +D SH  G N V   VV    G +K+ Y
Sbjct: 376 GRKLAETSSQARLLKGFAETFNLPYVPRRIEIYDNSHIMGTNAVGGMVVAGPEGFVKNQY 435

Query: 438 RLYNIEG--VTAGDDYAAMRQVLSRRYKRMVAGEGKR-------------------PDLV 476
           R +NI+   +T GDD+  MR+V++RR+ R++  EGK                    PD++
Sbjct: 436 RKFNIKSTDITPGDDFGMMREVMTRRFSRLLKEEGKPDRAQTPTPEEAADLPFPAWPDVI 495

Query: 477 FIDGGKGQLNIAREVFDELEISD-IPLIGVAKGVTRRAGMEQLIDAMTGDVFRVPADSPA 535
            IDGG+GQ+   R + DEL I D +  IGVAKGV R AG E+       D F +P   P 
Sbjct: 496 LIDGGQGQMTAVRAILDELGIRDCVTAIGVAKGVDREAGRERFFADGRSD-FSLPPRDPV 554

Query: 536 LHLIQHIRDESHRFAITGHRARRDKKRRQSTLEGIEGVGPKKRRDLIRYFGGIQELRKAG 595
           L+ IQ +RDE+HRFAI  HRARR K+  ++ L+ I G+GP ++R L+++FG  + + +AG
Sbjct: 555 LYFIQRMRDEAHRFAIGSHRARRKKEMVRNPLDEISGIGPGRKRSLLQHFGTAKAVSRAG 614

Query: 596 VDEMTKVQGISKSLAETIYAALHD 619
           ++++  V GIS+++A  IY   H+
Sbjct: 615 LNDLMTVTGISETVARQIYNHFHE 638