Pairwise Alignments

Query, 624 a.a., preprotein translocase subunit SecD from Marinobacter adhaerens HP15

Subject, 615 a.a., protein translocase subunit SecD from Pectobacterium carotovorum WPP14

 Score =  548 bits (1413), Expect = e-160
 Identities = 299/628 (47%), Positives = 429/628 (68%), Gaps = 24/628 (3%)

Query: 1   MLNKYPLWKNLVILVALVIGFIYALPNLFPDDYAIQITGARSSTEVNAGVLDRAVGVLES 60
           MLN+YPLWK L+++V L +G +YALPNL+ +D A+Q+TGAR  T  +   L +   VL+ 
Sbjct: 1   MLNRYPLWKYLMLVVVLFVGLLYALPNLYGEDPAVQVTGARG-TAASETTLIQVQNVLKE 59

Query: 61  RGIEVKSSTLQDRDALIRLTNSEDQLQARPLVQAALGNEYLVALNMAASTPGWLKSLGAG 120
           + I  KS  L++   L R +N + QL+AR  +   LG +++VALN+A +TP WL+ LGA 
Sbjct: 60  QNITSKSIALENGAILARFSNPDIQLRAREALVNELGEKFVVALNLAPATPTWLRLLGAE 119

Query: 121 PMKLGLDLRGGVHFLLEVDMETAVSQRLDAMSGQIKRELREERIRYRGGDVQDNREIVLS 180
           PMKLGLDLRGGVHFL+EVDM+TA+ +  +     ++ +LRE+ I Y      DN  + + 
Sbjct: 120 PMKLGLDLRGGVHFLMEVDMDTALGKLQEQTMDSLRSDLREKNIPYASVRKIDNYGVEIR 179

Query: 181 FRDEASRTEAFNMVRDQYNEFLLDEQTEGDEFLLVLTLSEAEVTAIQDYALEQNLTTIRN 240
           FRD  +R +  N +  ++   +L         LL   +S+  +   ++YA++QN+  +RN
Sbjct: 180 FRDAQTRDDGLNYLTTRHRNLVLSSSGSN---LLRAVMSDERLREAREYAVQQNINILRN 236

Query: 241 RVNELGVAEPLVQQQGADRIIVELPGVQDTAQAKRVLGATANLEFRM-EARQDAPSS--- 296
           RVN+LGVAEPLVQ+QGADRI+VELPG+QDTA+AK +LGATA LEFR+  +  DA ++   
Sbjct: 237 RVNQLGVAEPLVQRQGADRIVVELPGIQDTARAKEILGATATLEFRLVNSNADATAAANG 296

Query: 297 ----ETEEFGFRDQPQRTARLEQEVIATGNNVANAQQAFDENGQPQVNITMDSVGGDLMN 352
               ++E    RD       L + VI TG+++ ++  + DE  QPQVNI++DS GG+ M+
Sbjct: 297 RVPGDSEVKNMRDGSPVV--LFKRVILTGDHITDSTSSTDEYNQPQVNISLDSAGGNTMS 354

Query: 353 RATRNAIGRRMAVLFIEYRTETETRMVDGEPQEVENRVVEKG--IISLATVQSALGSSFR 410
             T+++IG+ MA LF+EY+         G+       ++EK   +I++AT+QS LG+SFR
Sbjct: 355 NFTKDSIGKLMATLFVEYKDS-------GKKDATGRSILEKHEEVINVATIQSRLGNSFR 407

Query: 411 ITGLDSIPEAAELALLLRAGALAAPMYFVQERTIGPSLGQKNIDAGMMSVALGFGLVLLY 470
           ITG+D+  EA +L+LLLRAGAL AP+  V+ERTIGP+LG +NI  G+ +   G    +L+
Sbjct: 408 ITGIDNPNEARQLSLLLRAGALIAPIQIVEERTIGPTLGMQNITQGLEACLWGLIASILF 467

Query: 471 MLVYYRGFGVVANIALTLNLMLLVACMSIL-SATLTLPGIAGIVLTVGMAVDANVLIFER 529
           M+ +Y+ FGV+A  AL  NL+L+V  MS+L  ATLT+PGIAGIVLT+ +AVDANVLI ER
Sbjct: 468 MVFFYKKFGVIATSALVANLVLIVGVMSLLPGATLTMPGIAGIVLTLAVAVDANVLINER 527

Query: 530 IKEELKSGVPPQTAINSGYSRAFVSIFDANITTLLVAVILFAMGSGPVKGFAVTLCIGIL 589
           IKEEL +G   Q AI+ GY  AF SI DAN+TTL+  +IL+A+G+G +KGFA+T  IGI 
Sbjct: 528 IKEELSNGRSVQQAIHEGYKGAFSSIVDANVTTLIKVIILYAVGTGSIKGFAITTAIGIA 587

Query: 590 TSMFSGLMVSRSIVNIVYGGRRVEKLSI 617
           TSMF+ ++ +R+IVN++YGG+R+ KLSI
Sbjct: 588 TSMFTAIVGTRAIVNLLYGGKRINKLSI 615