Pairwise Alignments

Query, 624 a.a., preprotein translocase subunit SecD from Marinobacter adhaerens HP15

Subject, 615 a.a., protein translocase subunit SecD from Erwinia tracheiphila SCR3

 Score =  547 bits (1410), Expect = e-160
 Identities = 295/627 (47%), Positives = 426/627 (67%), Gaps = 22/627 (3%)

Query: 1   MLNKYPLWKNLVILVALVIGFIYALPNLFPDDYAIQITGARSSTEVNAGVLDRAVGVLES 60
           MLN+YPLWK ++++V LV+G +YALPNL+ +D A+Q+TGAR S  V+   L +    L+ 
Sbjct: 1   MLNRYPLWKYIMLIVVLVVGTLYALPNLYGEDPAVQVTGARGSA-VSEQTLGQIQNALKQ 59

Query: 61  RGIEVKSSTLQDRDALIRLTNSEDQLQARPLVQAALGNEYLVALNMAASTPGWLKSLGAG 120
             I+ KS  L++   L R  N + QL+AR  +   LG +++VALN+A +TP WL  L A 
Sbjct: 60  ENIQSKSIALENGAILARFANGDVQLRARDALARILGEDFVVALNLAPATPAWLAMLSAE 119

Query: 121 PMKLGLDLRGGVHFLLEVDMETAVSQRLDAMSGQIKRELREERIRYRGGDVQDNREIVLS 180
           PMKLGLDLRGGVHFL+EVDM+TA+ +  +     ++ +LRE  I Y      DN  + + 
Sbjct: 120 PMKLGLDLRGGVHFLMEVDMDTALGKLQEQNIDSLRSDLRERNIPYANVRKTDNYGLEIR 179

Query: 181 FRDEASRTEAFNMVRDQYNEFLLDEQTEGDEFLLVLTLSEAEVTAIQDYALEQNLTTIRN 240
           FRD  +R +A + +  ++ + ++         LL   +S+  +   ++YA++QN+  +RN
Sbjct: 180 FRDTQTRDDASSWLTSRHRDLVIGNSGSN---LLRAVMSDDRLREAREYAVQQNINILRN 236

Query: 241 RVNELGVAEPLVQQQGADRIIVELPGVQDTAQAKRVLGATANLEFRM-EARQDAPSSETE 299
           RVN+LGVAEPLVQ+QG+DRI+VELPG+QDTA+AK +LGATA LEFR+     DA ++   
Sbjct: 237 RVNQLGVAEPLVQRQGSDRIVVELPGIQDTARAKEILGATATLEFRLVNTSVDATAAANG 296

Query: 300 EFGFRDQPQRTAR-----LEQEVIATGNNVANAQQAFDENGQPQVNITMDSVGGDLMNRA 354
                 + + T       L + VI TG+++ ++  + DE  Q QVNI++DS GG +M+  
Sbjct: 297 RVPGDSEVKNTRNGQSVVLYKRVILTGDHITDSTSSQDEYNQAQVNISLDSAGGTIMSNF 356

Query: 355 TRNAIGRRMAVLFIEYRTETETRMVDGEPQEVENRVV---EKGIISLATVQSALGSSFRI 411
           T++ IG+ MA LF+EY+        D   ++   R +   ++ +I++A +QS LG+SFRI
Sbjct: 357 TKDNIGKPMATLFVEYK--------DSGKKDANGRAILAKQEEVINVANIQSRLGNSFRI 408

Query: 412 TGLDSIPEAAELALLLRAGALAAPMYFVQERTIGPSLGQKNIDAGMMSVALGFGLVLLYM 471
           TG+ +  EA +L+LLLRAGAL AP+  V+ERTIGP++GQ+NI  G+ +   G    +L+M
Sbjct: 409 TGISNPTEARQLSLLLRAGALIAPIQIVEERTIGPTMGQQNITQGLEACLWGLIASILFM 468

Query: 472 LVYYRGFGVVANIALTLNLMLLVACMSIL-SATLTLPGIAGIVLTVGMAVDANVLIFERI 530
           ++YYR FGV+A  AL  NL+L+V  MS+L  ATLT+PGIAGIVLT+ +AVDANVLI ERI
Sbjct: 469 VIYYRKFGVIATTALIANLVLIVGIMSLLPGATLTMPGIAGIVLTLAVAVDANVLINERI 528

Query: 531 KEELKSGVPPQTAINSGYSRAFVSIFDANITTLLVAVILFAMGSGPVKGFAVTLCIGILT 590
           KEELK+G   Q AI+ GY  AF SI DAN+TTL+ AVIL+A+G+G +KGFA+T  IG+ T
Sbjct: 529 KEELKNGRSVQQAIHEGYRGAFSSIVDANVTTLITAVILYAVGTGSIKGFAITTAIGVAT 588

Query: 591 SMFSGLMVSRSIVNIVYGGRRVEKLSI 617
           SMF+ ++ +R+IVN++YGG+RV KLSI
Sbjct: 589 SMFTAIVGTRAIVNLLYGGKRVNKLSI 615