Pairwise Alignments

Query, 624 a.a., preprotein translocase subunit SecD from Marinobacter adhaerens HP15

Subject, 604 a.a., Protein translocase subunit SecD from Escherichia coli ECRC99

 Score =  523 bits (1348), Expect = e-153
 Identities = 282/616 (45%), Positives = 425/616 (68%), Gaps = 22/616 (3%)

Query: 12  VILVALVIGFIYALPNLFPDDYAIQITGARSSTEVNAGVLDRAVGVLESRGIEVKSSTLQ 71
           +++V +VIG +YALPNLF +D A+QITGAR     +   L +    L+   I  KS  L+
Sbjct: 1   MLIVVIVIGLLYALPNLFGEDPAVQITGARG-VAASEQTLIQVQKTLQEEKITAKSVALE 59

Query: 72  DRDALIRLTNSEDQLQARPLVQAALGNEYLVALNMAASTPGWLKSLGAGPMKLGLDLRGG 131
           +   L R  +++ QL+AR  +   +G++Y+VALN+A +TP WL ++ A PMKLGLDLRGG
Sbjct: 60  EGAILARFDSTDTQLRAREALMGVMGDKYVVALNLAPATPRWLAAIHAEPMKLGLDLRGG 119

Query: 132 VHFLLEVDMETAVSQRLDAMSGQIKRELREERIRYRGGDVQDNREIVLSFRDEASRTEAF 191
           VHFL+EVDM+TA+ +  +     ++ +LRE+ I Y     ++N  + ++FRD  +R EA 
Sbjct: 120 VHFLMEVDMDTALGKLQEQNIDSLRSDLREKGIPYTTVRKENNYGLSITFRDAKARDEAI 179

Query: 192 NMVRDQYNEFLLDEQTEGDEFLLVLTLSEAEVTAIQDYALEQNLTTIRNRVNELGVAEPL 251
             +  ++ + ++  Q       L   +S+A ++  ++YA++QN+  +RNRVN+LGVAEP+
Sbjct: 180 AYLSKRHPDLVISSQGSNQ---LRAVMSDARLSEAREYAVQQNINILRNRVNQLGVAEPV 236

Query: 252 VQQQGADRIIVELPGVQDTAQAKRVLGATANLEFRM-EARQDAPSSETEEFGFRDQPQRT 310
           VQ+QGADRI+VELPG+QDTA+AK +LGATA LEFR+     D  ++ +       + ++T
Sbjct: 237 VQRQGADRIVVELPGIQDTARAKEILGATATLEFRLVNTNVDQAAAASGRVPGDSEVKQT 296

Query: 311 AR-----LEQEVIATGNNVANAQQAFDENGQPQVNITMDSVGGDLMNRATRNAIGRRMAV 365
                  L + VI TG+++ ++  + DE  QPQVNI++DS GG++M+  T++ IG+ MA 
Sbjct: 297 REGQPVVLYKRVILTGDHITDSTSSQDEYNQPQVNISLDSAGGNIMSNFTKDNIGKPMAT 356

Query: 366 LFIEYRTETETRMVDGEPQEVENRVV---EKGIISLATVQSALGSSFRITGLDSIPEAAE 422
           LF+EY+        D   ++   R V   ++ +I++A +QS LG+SFRITG+++  EA +
Sbjct: 357 LFVEYK--------DSGKKDANGRAVLVKQEEVINIANIQSRLGNSFRITGINNPNEARQ 408

Query: 423 LALLLRAGALAAPMYFVQERTIGPSLGQKNIDAGMMSVALGFGLVLLYMLVYYRGFGVVA 482
           L+LLLRAGAL AP+  V+ERTIGP+LG +NI+ G+ +   G  + +L+M+++Y+ FG++A
Sbjct: 409 LSLLLRAGALIAPIQIVEERTIGPTLGMQNIEQGLEACLAGLLVSILFMIIFYKKFGLIA 468

Query: 483 NIALTLNLMLLVACMSIL-SATLTLPGIAGIVLTVGMAVDANVLIFERIKEELKSGVPPQ 541
             AL  NL+L+V  MS+L  ATL++PGIAGIVLT+ +AVDANVLI ERIKEEL +G   Q
Sbjct: 469 TSALIANLILIVGIMSLLPGATLSMPGIAGIVLTLAVAVDANVLINERIKEELSNGRTVQ 528

Query: 542 TAINSGYSRAFVSIFDANITTLLVAVILFAMGSGPVKGFAVTLCIGILTSMFSGLMVSRS 601
            AI+ GY  AF SIFDANITTL+  +IL+A+G+G +KGFA+T  IG+ TSMF+ ++ +R+
Sbjct: 529 QAIDEGYRGAFSSIFDANITTLIKVIILYAVGTGAIKGFAITTGIGVATSMFTAIVGTRA 588

Query: 602 IVNIVYGGRRVEKLSI 617
           IVN++YGG+RV+KLSI
Sbjct: 589 IVNLLYGGKRVKKLSI 604