Pairwise Alignments

Query, 624 a.a., preprotein translocase subunit SecD from Marinobacter adhaerens HP15

Subject, 615 a.a., protein translocase subunit SecD from Dickeya dadantii 3937

 Score =  554 bits (1427), Expect = e-162
 Identities = 298/629 (47%), Positives = 436/629 (69%), Gaps = 26/629 (4%)

Query: 1   MLNKYPLWKNLVILVALVIGFIYALPNLFPDDYAIQITGARSSTEVNAGVLDRAVGVLES 60
           MLN+YPLWK L+++V +V+G +YALPNL+ +D AIQ+TGAR  T  +   L +   VL+ 
Sbjct: 1   MLNRYPLWKYLMLIVTIVVGLLYALPNLYGEDPAIQVTGARG-TAASESTLVQIQNVLKE 59

Query: 61  RGIEVKSSTLQDRDALIRLTNSEDQLQARPLVQAALGNEYLVALNMAASTPGWLKSLGAG 120
           + +  KS  L++   L R +  + QL+AR ++  ALG +++VALN+A +TP WL+ LGA 
Sbjct: 60  QNVASKSIALENGAILARFSTPDVQLRAREVLLNALGEKFVVALNLAPATPTWLRMLGAE 119

Query: 121 PMKLGLDLRGGVHFLLEVDMETAVSQRLDAMSGQIKRELREERIRYRGGDVQDNREIVLS 180
           PMKLGLDLRGGVHFL+EVDM+TA+ +  +     ++ +LRE+ I+Y      DN  + + 
Sbjct: 120 PMKLGLDLRGGVHFLMEVDMDTALGKLQEQTMDSLRSDLREKGIQYASVRKSDNYGVEIL 179

Query: 181 FRDEASRTEAFNMVRDQYNEFLLDEQTEGDEFLLVLTLSEAEVTAIQDYALEQNLTTIRN 240
           FRD   R +A   +  ++ + +++    G + L  + +S+A +   ++YA++QN+  +RN
Sbjct: 180 FRDGQLRDDAVTYLTSRHRDLVIN--ASGSDTLRAV-MSDARLREAREYAVQQNINILRN 236

Query: 241 RVNELGVAEPLVQQQGADRIIVELPGVQDTAQAKRVLGATANLEFRMEARQDAPSS---- 296
           RVN+LGVAEPLVQ+QGADRI+VELPG+QDTA+AK +LGATA LEFR+      P +    
Sbjct: 237 RVNQLGVAEPLVQRQGADRIVVELPGIQDTARAKEILGATATLEFRLVNSNVDPVALSNG 296

Query: 297 ----ETEEFGFRDQPQRTARLEQEVIATGNNVANAQQAFDENGQPQVNITMDSVGGDLMN 352
               +TE    RD       L + VI TG+++ ++    DE  +PQVNI++DS GG+ M+
Sbjct: 297 RVPGDTEVMNMRDGGP--VALYKRVILTGDHITDSTSGNDEYNRPQVNISLDSAGGNAMS 354

Query: 353 RATRNAIGRRMAVLFIEYRTETETRMVDGEPQEVENRVV---EKGIISLATVQSALGSSF 409
             T++ IG+ MA LF+EY+        D   ++   R +   ++ +I++AT+QS LG+SF
Sbjct: 355 NFTKDNIGKPMATLFVEYK--------DSGKKDANGRAILEKQEEVINVATIQSRLGNSF 406

Query: 410 RITGLDSIPEAAELALLLRAGALAAPMYFVQERTIGPSLGQKNIDAGMMSVALGFGLVLL 469
           RITG+D+  EA +L+LLLRAGAL AP+  V+ERTIGP+LG +NI  G+ +   G  + +L
Sbjct: 407 RITGIDNPNEARQLSLLLRAGALIAPIQIVEERTIGPTLGMQNITQGLEACLAGLAVSIL 466

Query: 470 YMLVYYRGFGVVANIALTLNLMLLVACMSIL-SATLTLPGIAGIVLTVGMAVDANVLIFE 528
           +M+ +Y+ FG++A  AL LNL+L+V  MS+L  ATLT+PGIAGIVLT+ +AVDANVLI E
Sbjct: 467 FMIFFYKKFGMIATSALLLNLVLVVGIMSLLPGATLTMPGIAGIVLTLAVAVDANVLINE 526

Query: 529 RIKEELKSGVPPQTAINSGYSRAFVSIFDANITTLLVAVILFAMGSGPVKGFAVTLCIGI 588
           RIKEEL +G   Q AI+ GY  AF SIFDAN+TTL+  +IL+A+G+G +KGFA+T  IG+
Sbjct: 527 RIKEELSNGRTVQQAIDEGYRGAFSSIFDANVTTLIKVIILYAVGTGSIKGFAITTGIGV 586

Query: 589 LTSMFSGLMVSRSIVNIVYGGRRVEKLSI 617
            TSMF+ ++ +R+IVN++YGG+RV+KLSI
Sbjct: 587 ATSMFTAIVGTRAIVNLLYGGKRVKKLSI 615