Pairwise Alignments

Query, 235 a.a., DNA polymerase III, epsilon subunit from Marinobacter adhaerens HP15

Subject, 243 a.a., DNA polymerase III subunit epsilon (NCBI) from Escherichia coli BW25113

 Score = 46.6 bits (109), Expect = 4e-10
 Identities = 49/176 (27%), Positives = 80/176 (45%), Gaps = 19/176 (10%)

Query: 40  RLIVLDLETTGLNP-----SKDEVIAIGAVAIRGGIIHLGDQFDLILRRPELDIRETVLI 94
           R IVLD ETTG+N         ++I IGAV +    +  G+ F + L+   L   E   +
Sbjct: 7   RQIVLDTETTGMNQIGAHYEGHKIIEIGAVEVVNRRL-TGNNFHVYLKPDRLVDPEAFGV 65

Query: 95  HGIGPEALTQGHEIEDALLYLLEWMNGDPILAYHSAFDQKFLE---KTLKAQLGYTQPHT 151
           HGI  E L       +     ++++ G  ++ +++AFD  F++     LK  +  T  +T
Sbjct: 66  HGIADEFLLDKPTFAEVADEFMDYIRGAELVIHNAAFDIGFMDYEFSLLKRDIPKT--NT 123

Query: 152 WMDVADLMPA---FFPNTKTGGKGLDNWADYFGLEVSER--HHAASDALATAELTL 202
           +  V D +      FP  +     LD     + ++ S+R  H A  DA   AE+ L
Sbjct: 124 FCKVTDSLAVARKMFPGKR---NSLDALCARYEIDNSKRTLHGALLDAQILAEVYL 176