Pairwise Alignments

Query, 277 a.a., transposase OrfAB, subunit B from Marinobacter adhaerens HP15

Subject, 248 a.a., IS3 family transposase from Escherichia coli ECRC98

 Score =  279 bits (713), Expect = 5e-80
 Identities = 124/234 (52%), Positives = 168/234 (71%)

Query: 34  LKAQVNRLFTKSRSSAGSRTIKGMLNDDGVVIGRFKVRRLMSELGLICKQPGPHAYKQAT 93
           L +++ R + +SR SAG+RT+  ML  +GV + R++  RLM  L L   QPG H YK A 
Sbjct: 1   LCSEIRRAWNQSRGSAGARTLAEMLTQNGVPMSRYRAGRLMKYLNLSSCQPGKHQYKNAR 60

Query: 94  VERPDIPNHLAREFTVDRPNQAWCGDITYVWSGQRWSYLAVVLDLYARRVVGWAMSSSPD 153
            E   +PN L R+F V  P++ WCGDITY+W+G RW YLAVV+DL+ARRV+GW++S++ D
Sbjct: 61  QEHTCLPNLLERQFAVPEPDRVWCGDITYIWAGNRWCYLAVVMDLFARRVIGWSLSANAD 120

Query: 154 ADLVVKALDHSWEQRGQPEKVMFHSDQGSQYASRKFRQRLWRYRMTQSMSRRGNCWDNAP 213
             L+  AL  ++E RGQP  VMFHSDQGSQY   K++Q LWRYR+ QS+SRRGNCWDN+P
Sbjct: 121 TALISSALRMAYEVRGQPRDVMFHSDQGSQYTGLKYQQLLWRYRIKQSVSRRGNCWDNSP 180

Query: 214 MERLFRSLKSEWIPALGYRNLPEAKKDVGGYLMDYYNQQRPHTFNGGISPVAAE 267
           MER FRSLK+EW+P  GY     A++ +  Y+++YYN  RPH +NGG++P  +E
Sbjct: 181 MERFFRSLKTEWVPTDGYTGKDVARQQISSYILNYYNSVRPHHYNGGLTPEESE 234