Pairwise Alignments

Query, 389 a.a., transcriptional regulator, AraC family protein from Marinobacter adhaerens HP15

Subject, 334 a.a., AraC family transcriptional regulator from Pseudomonas simiae WCS417

 Score =  112 bits (279), Expect = 2e-29
 Identities = 82/319 (25%), Positives = 139/319 (43%)

Query: 58  RLIYEAMKKKGIDTNAIFSRLGVDENYVYTEQLRTPHSAQMYFWQAVEDVSGDPDVGLHL 117
           R + + +   G+D+ A+  + G+D   +     R P SA    W+     SGDP +GL +
Sbjct: 12  RALRKQLDALGLDSAALCLQAGLDPQKMDDPNARYPLSATTRLWELAVQASGDPAIGLRV 71

Query: 118 GQLLPAYKGQVLEYLFLSSPTFGEGLRRAQNYQRLLSDAANTDFFIEGDDACMVLDAASD 177
            + + A     L Y  ++S +  E   R   Y +++SDA + +   +G+     L     
Sbjct: 72  SRFVSATTFHALGYALVASGSLREVFERIVRYHQVVSDALSLELSGDGERYRFRLLQLPG 131

Query: 178 DVRRLRHFNECFVLGLITFFRSITDGNFYPSRIEFEHERAEGQDHVREVLGCDVTFGAPE 237
                    + F    +   R+     + P  +               V    V F A E
Sbjct: 132 SPAPAFEAIDAFAAIYVRTCRNRLGREYAPLAVYLRRPEPVDPKPWHTVFRAPVFFDAEE 191

Query: 238 NRLYFPAKLLSHASPHAEPELLDLHERFASEQVARLEKKDIVGQVERIVAELLDSGEVTL 297
           +RL F A         A PEL + +E      +A+L+      +V   +   L  GE + 
Sbjct: 192 DRLEFAAADFDSHLDDANPELAEHNETVLKRTLAQLQPLTWERKVRAAIEAQLPDGEPSA 251

Query: 298 DAVAERLGIKPRTLRTRLTEAETSFNQVLADFRYRLARQLLATTDESIDEIVYLTGFSEP 357
           + +A+ L +  R+L+  L +    F+ +L++ R  LA   L     S+ EI +L GF++ 
Sbjct: 252 ERIAQALHLSLRSLQRHLADEGCRFDALLSECRENLALLHLRDPHCSLAEISHLLGFADT 311

Query: 358 STFYRAFKRWSGMTPIEYR 376
           S+F RAFKRW+GMTP ++R
Sbjct: 312 SSFNRAFKRWTGMTPGQFR 330