Pairwise Alignments

Query, 389 a.a., transcriptional regulator, AraC family protein from Marinobacter adhaerens HP15

Subject, 336 a.a., transcriptional regulator, AraC family protein from Marinobacter adhaerens HP15

 Score =  126 bits (317), Expect = 8e-34
 Identities = 87/319 (27%), Positives = 138/319 (43%), Gaps = 3/319 (0%)

Query: 60  IYEAMKKKGIDTNAIFSRLGVDENYVYTEQLRTPHSAQMYFWQAVEDVSGDPDVGLHLGQ 119
           +  A ++  +  N + +  G+ E     E  R P       W A E  +GDP  GL +G 
Sbjct: 15  VISAAERLSLSANQLLAEAGIPEAACELE--RWPIDDITRLWHAAERCTGDPGFGLKVGA 72

Query: 120 LLPAYKGQVLEYLFLSSPTFGEGLRRAQNYQRLLSDAANTDFFIEGDDACMVLDAASDDV 179
                    + +   S+ T  E +   Q +QRL+SD              +V       +
Sbjct: 73  EFSPMSISGVGFALQSAATLREAIVMVQRFQRLISDGGRFQIVAGNTATWLVYHPRQGRL 132

Query: 180 RRLRHFNECFVLGLITFFRSITDGNFYPSRIEFEHERAEGQDHVREVLGCDVTFGAPENR 239
               H  E  +  ++ F   +T     PSR++F   R       + V  C V F    + 
Sbjct: 133 AFSPHQIEAVLASVVGFGSWVTGTRMQPSRVQFSQPRLGPLAGYQTVFNCPVEFEQAFSG 192

Query: 240 LYFPAKLLSHASPHAEPELLDLHERFASEQVARLEKKDI-VGQVERIVAELLDSGEVTLD 298
           +     +L    P A+P+L  +HER+ + ++A L      V ++ R +   +        
Sbjct: 193 VQIDNAVLDQPLPQADPQLAQVHERYTNARLAALSINSASVPEIRRWLNARIGPVLPRRA 252

Query: 299 AVAERLGIKPRTLRTRLTEAETSFNQVLADFRYRLARQLLATTDESIDEIVYLTGFSEPS 358
             AE LGI  R+L  RL E   +F+ ++ D R   A Q +A +  S+ EI    GF+E S
Sbjct: 253 DAAEALGISERSLARRLREQGQTFDGLVDDVRREKALQAVADSSASLPEIAEALGFAEVS 312

Query: 359 TFYRAFKRWSGMTPIEYRK 377
           TFYRAF+RW+GM P+ +RK
Sbjct: 313 TFYRAFRRWTGMPPVRWRK 331