Pairwise Alignments

Query, 389 a.a., transcriptional regulator, AraC family protein from Marinobacter adhaerens HP15

Subject, 358 a.a., AraC-type DNA-binding domain-containing protein from Marinobacter adhaerens HP15

 Score =  112 bits (280), Expect = 2e-29
 Identities = 78/289 (26%), Positives = 134/289 (46%), Gaps = 6/289 (2%)

Query: 91  RTPHSAQMYFWQAVEDVSGDPDVGLHLGQLLPAYKGQVLEYLFLSSPTFGEGLRRAQNYQ 150
           R P  A    W+  E V+GDP VGLH G+++   +  ++ ++F +  T GE + +     
Sbjct: 54  RVPADAHYRLWEHAELVTGDPAVGLHAGKVVDPERMGLVGHVFFNCDTLGEAVTQYVRLH 113

Query: 151 RLLSDAANTDFFIEGDDA--CMVLDAASDDVRRLRHFNECFVLGLITFFRSITDGNFYPS 208
           RL++++    F    D A  C   D A       R   +  +   IT  R          
Sbjct: 114 RLINESVFLSFEQTADQAILCWQPDMAE---HYCRQDMDRTLAAAITRTRHFIHPGIRAE 170

Query: 209 RIEFEHERAEGQDHVREVLGCDVTFGAPENRLYFPAKLLSHASPHAEPELLDLHERFASE 268
            +E  H          ++LG  V F     RL F ++ L H  P   P +     +  + 
Sbjct: 171 WVEIAHPAPVYAAEYEKLLGGPVRFDCGITRLAFNSRHLGHPIPRRNPYVYSAVLKQVNT 230

Query: 269 QVARLEKKDIVGQ-VERIVAELLDSGEVTLDAVAERLGIKPRTLRTRLTEAETSFNQVLA 327
            +ARL+ +   G+ + R++++ + +  +  D++A +  +  +TL  +L +   SF+ ++ 
Sbjct: 231 LLARLQSRRSFGRRIRRLISKQMATERIDADSLARQCHMSRQTLYRKLKKEGLSFHGLVE 290

Query: 328 DFRYRLARQLLATTDESIDEIVYLTGFSEPSTFYRAFKRWSGMTPIEYR 376
             R   A + +A    ++ EI +L GFSE S F RAFKRW+G +P EYR
Sbjct: 291 QVRQDKALRYVAADQYALGEIAFLLGFSELSAFSRAFKRWTGTSPAEYR 339