Pairwise Alignments

Query, 216 a.a., alkylated DNA repair protein AlkB from Marinobacter adhaerens HP15

Subject, 221 a.a., DNA oxidative demethylase AlkB from Pseudomonas fluorescens SBW25

 Score =  242 bits (618), Expect = 3e-69
 Identities = 119/216 (55%), Positives = 150/216 (69%), Gaps = 2/216 (0%)

Query: 2   TQDLFGEQPPEQTV--EPLVDGAVVLRQFALPNAESLMADIETVTSEAPFRHMKTPGGHA 59
           T DLF +   +Q    E + + + VLR +ALP  E L+ ++  V +++PFR M TPGG  
Sbjct: 5   TADLFADDALQQPAGREQIGEQSYVLRGYALPWIERLLPELRQVLAQSPFRQMVTPGGFT 64

Query: 60  MSAAMSCCGDLGWVTDRRGYRYQAEDPESGRPWPAMPAAFRELARSAAETAGFEGFEPDA 119
           MSAA+S CGDLGW TD  GYRY   DP + +PWP MP   R+LA  AA  AGF  F PDA
Sbjct: 65  MSAALSSCGDLGWTTDTSGYRYSPLDPRTQQPWPHMPDTLRQLAVLAAADAGFVDFAPDA 124

Query: 120 CLINRYQPGAKMGLHQDKDEQDFTQPIVSVSLGLPMVFQFGGLKRSERPIRVPLAHGDVV 179
           CLINRY PGAKM LHQDK+E+ +++P+VSVSLGLP +F FGG +RS +  +V L HGDVV
Sbjct: 125 CLINRYVPGAKMSLHQDKNERRYSEPVVSVSLGLPAIFLFGGHERSAKAQKVSLFHGDVV 184

Query: 180 VWGGPARMRYHGVLTLKAGEHPLTGGYRYNLTFRRA 215
           VWGG  R+R+HGV+ +K G HP+ G  R NLTFR A
Sbjct: 185 VWGGVDRLRFHGVMPIKDGVHPVMGPQRINLTFRTA 220