Pairwise Alignments

Query, 216 a.a., alkylated DNA repair protein AlkB from Marinobacter adhaerens HP15

Subject, 216 a.a., oxidative demethylase of N1-methyladenine or N3-methylcytosine DNA lesions (NCBI) from Escherichia coli BW25113

 Score =  265 bits (676), Expect = 6e-76
 Identities = 129/212 (60%), Positives = 154/212 (72%), Gaps = 2/212 (0%)

Query: 4   DLFGEQPPEQTVEPLVDGAVVLRQFALPNAESLMADIETVTSEAPFRHMKTPGGHAMSAA 63
           DLF +  P Q  EPL  GAV+LR+FA   AE L+ DI  V S++PFR M TPGG+ MS A
Sbjct: 3   DLFADAEPWQ--EPLAAGAVILRRFAFNAAEQLIRDINDVASQSPFRQMVTPGGYTMSVA 60

Query: 64  MSCCGDLGWVTDRRGYRYQAEDPESGRPWPAMPAAFRELARSAAETAGFEGFEPDACLIN 123
           M+ CG LGW T R+GY Y   DP++ +PWPAMP +F  L + AA  AG+  F+PDACLIN
Sbjct: 61  MTNCGHLGWTTHRQGYLYSPIDPQTNKPWPAMPQSFHNLCQRAATAAGYPDFQPDACLIN 120

Query: 124 RYQPGAKMGLHQDKDEQDFTQPIVSVSLGLPMVFQFGGLKRSERPIRVPLAHGDVVVWGG 183
           RY PGAK+ LHQDKDE D   PIVSVSLGLP +FQFGGLKR++   R+ L HGDVVVWGG
Sbjct: 121 RYAPGAKLSLHQDKDEPDLRAPIVSVSLGLPAIFQFGGLKRNDPLKRLLLEHGDVVVWGG 180

Query: 184 PARMRYHGVLTLKAGEHPLTGGYRYNLTFRRA 215
            +R+ YHG+  LKAG HPLT   RYNLTFR+A
Sbjct: 181 ESRLFYHGIQPLKAGFHPLTIDCRYNLTFRQA 212