Pairwise Alignments

Query, 541 a.a., methyl-accepting chemotaxis sensory transducer from Marinobacter adhaerens HP15

Subject, 540 a.a., chemotaxis protein from Pseudomonas simiae WCS417

 Score =  202 bits (515), Expect = 2e-56
 Identities = 127/393 (32%), Positives = 213/393 (54%), Gaps = 20/393 (5%)

Query: 156 REPARLIVDAATA-VREDSLDRARTLNTVVTERSWLVAGLLIAAIILGTIALIMILLSGV 214
           RE  R+++++    ++E ++      N+ +T   W+++G+++A +I   I +++  L  +
Sbjct: 159 RELIRVMIESNNRQIKEGAVAADELRNSALT---WMISGIVLAFLIAIIIGVLITRL--I 213

Query: 215 VRPAQKLTSQISRLGDGDLSDPVTMQRADELGQLADAARSLHRFLSDTGSQLSENARQLN 274
            RP  +      R+  GDL+  +  +R DE GQL  A   +   L  T  +++  + QL 
Sbjct: 214 TRPIAQAVQSAQRIAQGDLTQAIITERTDEAGQLLMALSDMQGGLKSTLVEIANASDQLA 273

Query: 275 DTGELIRQNADSVVSQSDLAHQRIEQIATAMNEMSATAEDVASHAASVATEVSQTSDETA 334
              E +    D         +  I+Q ATA+N+M+A  ++VAS+A S +    Q + E  
Sbjct: 274 SAAEELSAVTDESSRGLTRQNDEIQQAATAVNQMTAAVDEVASNAVSTSEASRQATTEAE 333

Query: 335 TADSQINKAVDSMRRLTDQIRNSAETVNQLANDGKKVGDVMQVIREIADQTNLLALNAAI 394
               Q+ +AV  M  +  +I +S ++V  LA   +++G V+ VIR IADQTNLLALNAAI
Sbjct: 334 DGRQQVEQAVSGMSSMVVEINDSTQSVADLAGQVREIGKVIDVIRGIADQTNLLALNAAI 393

Query: 395 EAARAGDAGRGFAVVADEVRNLAAKTQEATVEIDQIIGAISGASRDATEFMQAS------ 448
           EAARAG+ GRGFAVVADEVR LA +TQ +TV+I+++IG +   + DA   M  S      
Sbjct: 394 EAARAGEQGRGFAVVADEVRALAHRTQISTVDIEKMIGDVQTGADDAVAAMNKSLTWANN 453

Query: 449 -GVVAQESSEAVEAVRATLAEINRRMGSINDATTQVATAAEEQTSVCEDINRNVTDVAET 507
              +AQ + EA++ + A++A+IN R          +A+A+EEQ  V  +++RN+ ++ + 
Sbjct: 454 TQTLAQNAGEALQRITASVAKINER-------NLVIASASEEQAQVAREVDRNLLNIQDL 506

Query: 508 SEAMHQAAENNLRTVPELEAMAARAQELAGRIK 540
           S      A     +  +L  +A     L  + +
Sbjct: 507 STQTAAGAHQTNASSQDLSRLATSFNVLVSKFQ 539