Pairwise Alignments

Query, 178 a.a., RNA 2',3'-cyclic phosphodiesterase from Magnetospirillum magneticum AMB-1

Subject, 210 a.a., 2'-5' RNA ligase family protein from Rhodanobacter denitrificans FW104-10B01

 Score = 53.1 bits (126), Expect = 3e-12
 Identities = 56/187 (29%), Positives = 78/187 (41%), Gaps = 21/187 (11%)

Query: 1   MIRLFVGIGFDEELTARIA----TLQRGLPG--ARWIEPANLHLTLRFIGE---VDEDLA 51
           M RLF+ +  D    AR+A     L+ G P   ARW+ PA  H TL F+G+   + + + 
Sbjct: 26  MHRLFLALLPDAATRARLAQAAAALKAGQPDLRARWVNPARYHATLHFLGDHALLRQAVV 85

Query: 52  EEIHRGLDALVEPPFALTLAGLGLFGDRHQAHTLWLGVERSDALSRLAARIESAAVQAG- 110
           +        L   PFA  L     F  R Q   +       + L RL   +  A V AG 
Sbjct: 86  DAAMTAARGLRMAPFAWVLHEAASFQGR-QPPCILRSASVPEPLQRLWHDLRRALVLAGQ 144

Query: 111 AEPETRRFNPHVTLARLKHTPPGRIQDFIDATGPFREEHVAVERFTLFRSTLGRQGAQYD 170
                R F PHVT+A   ++   R+     A+ P       VERF L    +G+    Y 
Sbjct: 145 GRHVARHFTPHVTIA---YSQGARL-----ASTPITPVTWPVERFALVHGVVGQ--PDYQ 194

Query: 171 ALEHYPL 177
            L  +PL
Sbjct: 195 VLAEWPL 201