Pairwise Alignments

Query, 242 a.a., DNA-binding response regulator from Magnetospirillum magneticum AMB-1

Subject, 241 a.a., Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain from Sphingomonas koreensis DSMZ 15582

 Score =  101 bits (252), Expect = 1e-26
 Identities = 72/187 (38%), Positives = 97/187 (51%), Gaps = 6/187 (3%)

Query: 10  IAIVDDDPLFRETLAGNLGDAGYGVRAWGDGEAFLADLAAQTEPDLLLLDWKMPGINGIE 69
           I IVDDDP  R+ L    G AG      GDGE  LA +A Q  P L++LD  MP ++G+E
Sbjct: 10  ILIVDDDPHIRQLLVFAFGKAGLETVEAGDGEEALAAVARQ-RPSLIVLDINMPRMDGLE 68

Query: 70  VLRRLRSAQVALPVIFLTVLSDQIFEEAALLGGAVDFIEKSRSFTILERRIALTLGRAAA 129
           V RRLR+A   +P++FL+   D+I     +  G  D++ K  S   +  R    L R AA
Sbjct: 69  VCRRLRAAG-DVPILFLSSRDDEIDRVLGIELGGDDYVVKPFSPREVVARSMAILRRTAA 127

Query: 130 AEP----AAATRVGGLSLDTTSRRAQWRGRPVDLTVGEFSMVEALAAKAGRDVSYRELYD 185
             P     A    GGLS+D  +  A W+G  V LTV EF+++  LA+   R  S   + D
Sbjct: 128 TPPPVENVAKLDYGGLSIDADAWSASWQGVEVPLTVTEFTILRTLASMPSRIFSRDMIID 187

Query: 186 SGRGKGF 192
              G GF
Sbjct: 188 RLHGPGF 194