Pairwise Alignments

Query, 242 a.a., DNA-binding response regulator from Magnetospirillum magneticum AMB-1

Subject, 236 a.a., Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain from Sphingomonas koreensis DSMZ 15582

 Score =  117 bits (292), Expect = 3e-31
 Identities = 87/243 (35%), Positives = 123/243 (50%), Gaps = 24/243 (9%)

Query: 10  IAIVDDDPLFRETLAGNLGDAGYGVRAWGDGEAFLADLAAQTEPDLLLLDWKMPGINGIE 69
           IA+VDDD     +++  L   G+  R + DGE  L  L  +  PDL +LD KMP ++G+E
Sbjct: 5   IALVDDDRNILTSVSIALQAEGFVTRVYSDGETALKALL-ENPPDLAVLDIKMPRLDGLE 63

Query: 70  VLRRLRSAQVALPVIFLTVLSDQIFEEAALLGGAVDFIEKSRSFTILERRIALTLGRA-- 127
           +LRRLR  +++ PVIFLT   D++ E   L  GA D+I K  S  +L  RI   L R   
Sbjct: 64  LLRRLRE-KLSTPVIFLTSKDDELDEALGLAMGADDYIAKPFSQRLLIARIRAILRRTEA 122

Query: 128 --------AAAEPAAATRVGGLSLDTTSRRAQWRGRPVDLTVGEFSMVEALAAKAGRDVS 179
                    A EP      G L++D    +  W G  V LTV EF ++E LA + G   +
Sbjct: 123 LAAPADAETAEEPQPVLERGRLTMDPARHKVTWGGGNVTLTVTEFLILETLAQRPGIVKT 182

Query: 180 YRELYDSGRGKGFHGGAGEDGYRTNVR---AAIKRIREKFKTVDPDFEQIGNYPGFGYVW 236
             +L D+         A +D    + R   + IKR+R KF+ VDP+F+ I    G GY +
Sbjct: 183 RNQLMDA---------AYQDDIYVDDRTIDSHIKRVRRKFRQVDPEFDAIETLYGAGYRF 233

Query: 237 QAE 239
             E
Sbjct: 234 SDE 236