Pairwise Alignments

Query, 188 a.a., site-specific integrase from Magnetospirillum magneticum AMB-1

Subject, 311 a.a., tyrosine recombinase XerC from Vibrio cholerae E7946 ATCC 55056

 Score = 46.2 bits (108), Expect = 6e-10
 Identities = 41/178 (23%), Positives = 82/178 (46%), Gaps = 14/178 (7%)

Query: 5   KVLSEAELKRVLSVVANQRHAARNRVALMLSFYAGMRVGEIAHLKLGDVIDGDGRVKDQI 64
           K L   E+ ++L V  +   + R+R  + L + AG+R+ E+  + + DV   +G ++   
Sbjct: 121 KNLDVDEMAQLLEVTDDDPLSIRDRAIMELMYGAGLRLAELVSIDIKDVNLSEGEIR--- 177

Query: 65  VLPASYTKTAEARTVFVSGKLRRELERFLSCNTTTDRAA--PFLVTQKATAFSANTLCQL 122
                  K  + R V+ +G+ +  + ++L   +    +A     V++  T  S  ++ + 
Sbjct: 178 ----VIGKGNKERKVWFAGQAQEWVGKWLKLRSQLADSAETALFVSKLGTRISHRSVQKR 233

Query: 123 ---FGQIYALAGIDGASSHSGRRWFITQMAHKGVSAKVIMTLAGHRHLSTTQRYIEVN 177
              +GQ  A+A     S H  R  F T M     + + +  L GH +++TTQ Y  ++
Sbjct: 234 MAEWGQKQAVA--SHISPHKLRHSFATHMLESSNNLRAVQELLGHENIATTQIYTHLD 289