Pairwise Alignments

Query, 314 a.a., tyrosine recombinase XerC from Magnetospirillum magneticum AMB-1

Subject, 321 a.a., integrase/recombinase XerD (RefSeq) from Shewanella amazonensis SB2B

 Score =  154 bits (390), Expect = 2e-42
 Identities = 109/302 (36%), Positives = 161/302 (53%), Gaps = 21/302 (6%)

Query: 18  VESWWQWLGSERRASSHTLDGYGRDLAAFLTFLTEHLAAEPDLAALASLGAGDFRAFLAR 77
           ++++   L S +  S +TL  Y  DL  F  FLT   A    L AL SL     R +LA 
Sbjct: 32  IDAFLDELWSLQGLSDNTLSAYRTDLCQFDAFLT---AKGIGLLALDSL---TLRDYLAY 85

Query: 78  RTQDGLGRSSLARLMSTLRGFFKFLDRHDLVHNPALK----AVKSPRPPKSVPKPLAPDE 133
           R + G+ ++S AR++S+LR F+    RH LV     +     ++SP+ PKS+P  L+  +
Sbjct: 86  RFEQGMAKTSTARMLSSLRRFY----RHQLVSGTLSEDPTALIESPKLPKSLPGSLSEAQ 141

Query: 134 ALEALSSAGELHDEPWLAARDVALFTLLYGAGLRLGEALSLTRRDLPKGDTMV-ITGKGN 192
             + L+      D+P +  RD A+  LLY  GLR+ E + L   +L     +V I GKG 
Sbjct: 142 VEQLLAEPSS--DDP-VECRDKAMLELLYATGLRVSELVGLGMSELGLRQGLVRIIGKGG 198

Query: 193 KQRVVPVLPVVRDAIADYL---KRLPYPAEPTDPIFLGARGGPLNPGVVQRQMRRLRQMM 249
           K+R+VP+  V +DA+  +L   +++      T+ +F   RG  +       +++      
Sbjct: 199 KERLVPMGEVAQDALEQFLAGPRQMLLKQGATEVVFPSNRGQQMTRQTFWHRIKLYALRA 258

Query: 250 GLPETATPHALRHSFATHLLAGGGDLRTIQELLGHSSLSTTQRYTEVDAARLTRVYRDAH 309
           G+    +PH LRH+FATHLL  G DLR +Q LLGHSSLSTTQ YT V   RL  ++   H
Sbjct: 259 GISTELSPHTLRHAFATHLLNHGADLRVVQLLLGHSSLSTTQIYTHVARTRLADLHEKHH 318

Query: 310 PR 311
           PR
Sbjct: 319 PR 320