Pairwise Alignments

Query, 931 a.a., DNA polymerase I from Magnetospirillum magneticum AMB-1

Subject, 923 a.a., DNA-directed DNA polymerase (RefSeq) from Shewanella amazonensis SB2B

 Score =  731 bits (1887), Expect = 0.0
 Identities = 414/944 (43%), Positives = 575/944 (60%), Gaps = 44/944 (4%)

Query: 7   APRHVTLIDGSGFIFRAFHGLPPMTRADGTPVNAVYGFTTMLMKLLADSSSDHVAVIFDS 66
           A   + L+DGS +++RA++  P +T + G    AVYG   ML  LL+      +AV+FD+
Sbjct: 5   ASNPLILVDGSSYLYRAYYAPPHLTNSKGEATGAVYGVVNMLRSLLSRYRPTQMAVVFDA 64

Query: 67  SRKTFRSAIYPEYKAHRPPAPEELVPQFPLVREATRAFDLPAIELEGFEADDLIATYARL 126
              TFR+ +Y EYKAHRPP P++L  Q   +    +A  +P I + G EADD+I T A  
Sbjct: 65  KGPTFRNEMYQEYKAHRPPMPDDLRSQIAPLHRIIKALGIPLISIPGVEADDVIGTIAIQ 124

Query: 127 AVEAGARVTIVSSDKDLMQLVGPGVEMIDPMKNRTIGEAEVREKFGVSPDKVVDVQALCG 186
           A   G  V I + DKD+ QLV   + +I+ M +  +G  EV  KFGV P+ ++D+ A+ G
Sbjct: 125 AGNEGRSVLISTGDKDMAQLVNEHITLINTMTDTILGPEEVATKFGVGPELIIDLLAMMG 184

Query: 187 DSSDNVPGVPGIGVKTAAQLIEEYGDLDTLLA----------RASEIKQPKRRESLIANA 236
           D +DN+PG+PG+G KTA  ++   G +  LLA          R ++    K R+    NA
Sbjct: 185 DKADNIPGLPGVGEKTALAMLTGAGGVAKLLAEPDCVTDLGFRGAKTMAAKIRD----NA 240

Query: 237 DLARISRELVRLRTDAPVPVPLSELDVKPPAPEKLAAFCAAQGFRSLMGRLNAKIPTAAP 296
           ++  +S +L  ++TD  +     +L +  P  ++L A      F+  +  +   +   +P
Sbjct: 241 EMLELSYKLATIKTDVTLEQDWHQLSLSEPNRDELIACYGEMEFKRWLAEV---LDNKSP 297

Query: 297 TATRAVLP------TEAPAEAPSLPPKVETAYELVTDLAALENWIALATGGGLVGFDTET 350
             T+A  P      TE+PA A      +ET Y  +   + L+ W+   +   L+  DTET
Sbjct: 298 LGTKAAAPQANQETTESPAAAV-----IETQYHTLLTESELDAWLDKLSKAELIAVDTET 352

Query: 351 TGLDPLRARLVGVSLAVAPGRACYIPVLHAPAQAQGDLLGGPSTDAPQIIPAAETLARLK 410
           T LD ++A LVG+S A+  G+A Y+P+ H       D  G PS      +P   TLA+LK
Sbjct: 353 TSLDYMQAELVGLSFAIEAGKAAYLPLGH-------DYPGAPSQ-----LPREATLAKLK 400

Query: 411 PLLADPSVLKVGHNIKYDMQVMAMQGLAVEPFD-DTMLLSYALDGASHGHGLDELCLLHL 469
           PLL +P + KVG N+KYDM V+A  G+ ++    DTML SY  +  +  H +D L L +L
Sbjct: 401 PLLENPDIKKVGQNLKYDMSVLANAGIQLKGVAFDTMLESYVFNSVASRHDMDGLALKYL 460

Query: 470 GHANIPFSEVCGSGRNQVTFDRVPLDKARDYAAEDADMTLRLHALLKPRLLSER-MVSVY 528
           GH NI F E+ G G  Q+TF+++ L++A  YAAEDAD+TLRLH  L PRL  E  + SV+
Sbjct: 461 GHKNISFEEIAGKGAKQLTFNQIALEQAAPYAAEDADITLRLHQHLWPRLSKEEGLESVF 520

Query: 529 ETLERPLVPVIAAMERDGIKVDRAQLMALSEDFGRRLTELETEVIALNNGEAFNLGSPQQ 588
             LE PL+ V++ +ER G+ +D   L   SE+  R++ ELE     +  GE FNL S +Q
Sbjct: 521 TELELPLIEVLSDIERRGVLIDSMLLGQQSEELARKIDELEQHAHEIA-GEPFNLSSTKQ 579

Query: 589 LGKVLFETLNLPGGKKTKTGQWATGADVLEELAPLHALPARLLDWRQLSKLKGTYTDALV 648
           L ++ F  L  P  KKT  G  +T  +VL ELA  + LP  +L+ R L+KLK TYTD L 
Sbjct: 580 LQELFFTKLGYPVIKKTPKGAPSTAEEVLVELALDYPLPKIILEHRSLTKLKSTYTDKLP 639

Query: 649 AQINPATGRVHTSYSLAATTTGRLSSSDPNLQNIPIRTEEGRKIRHAFVAEPGKKLVSAD 708
             IN  TGRVHTSY  A   TGRLSSSDPNLQNIPIRTEEGR+IR AFVA  GK++++AD
Sbjct: 640 LMINGRTGRVHTSYHQANAATGRLSSSDPNLQNIPIRTEEGRRIRQAFVAPEGKRILAAD 699

Query: 709 YSQIELRLVAHVAEIAGLRDAFAHGADIHAITASQVFGVPLDGIDPALRRRAKAINFGII 768
           YSQIELR++AH+++  GL  AFA G DIH  TA++VF V  + +    RRRAKA+NFG+I
Sbjct: 700 YSQIELRIMAHLSQDEGLLRAFAEGKDIHRATAAEVFDVAFETVTSEQRRRAKAVNFGLI 759

Query: 769 YGISAFGLAAQLGIPQGEAKAYIEAYFARYPEIRAYMERTKEEARDQGFVTTLFGRKVFT 828
           YG+SAFGLA QL IP+ EA++YI+ YF RYP +  YME T+  A +QG+V+TLFGR+++ 
Sbjct: 760 YGMSAFGLARQLDIPRNEAQSYIDTYFKRYPGVLKYMEETRAMASEQGYVSTLFGRRLYL 819

Query: 829 PGIKDKNGAMRAFAERAAINGPIQGGAADIIKRAMIRLPAALAAAGL-SARLLLQVHDEL 887
           P I+D+N   R  AERAAIN P+QG AADIIK+AMI +   +        ++++QVHDEL
Sbjct: 820 PEIRDRNAMRRQAAERAAINAPMQGTAADIIKKAMIAIQHWIKTETQGEIQMIMQVHDEL 879

Query: 888 VLEAPEAEADATVAVVKQVMEAAASLSVPLLVEAGIADTWGAAH 931
           V E    +ADA    V ++M AAASL VPLL EAG+ D W  AH
Sbjct: 880 VFEVDADKADALKEKVCELMAAAASLDVPLLAEAGLGDNWDQAH 923