Pairwise Alignments

Query, 931 a.a., DNA polymerase I from Magnetospirillum magneticum AMB-1

Subject, 930 a.a., DNA polymerase I (RefSeq) from Shewanella loihica PV-4

 Score =  747 bits (1929), Expect = 0.0
 Identities = 413/940 (43%), Positives = 582/940 (61%), Gaps = 33/940 (3%)

Query: 1   MTEVGEAPRHVTLIDGSGFIFRAFHGLPPMTRADGTPVNAVYGFTTMLMKLLADSSSDHV 60
           M  + E P  + L+DGS +++RA++  P +T + G    AVYG   ML  LL       +
Sbjct: 15  MPNIAENP--LILVDGSSYLYRAYYAPPHLTNSKGEATGAVYGVINMLRSLLNQYKPTQM 72

Query: 61  AVIFDSSRKTFRSAIYPEYKAHRPPAPEELVPQFPLVREATRAFDLPAIELEGFEADDLI 120
           AV+FD+  KTFR+ +Y EYKAHRPP P++L  Q   +    RA  LP + + G EADD+I
Sbjct: 73  AVVFDAKGKTFRNEMYAEYKAHRPPMPDDLRTQIEPLHRIIRALGLPLVCIPGVEADDVI 132

Query: 121 ATYARLAVEAGARVTIVSSDKDLMQLVGPGVEMIDPMKNRTIGEAEVREKFGVSPDKVVD 180
            T AR A + G  V I + DKD+ QLV   + +I+ M N  +G  EV EKFGV P+ ++D
Sbjct: 133 GTIARQASQEGRAVLISTGDKDMAQLVDDKITLINTMTNTILGPDEVSEKFGVGPELIID 192

Query: 181 VQALCGDSSDNVPGVPGIGVKTAAQLIEEYGDLDTLLARASEIKQ-----PKRRESLIA- 234
           + AL GD +DN+PG+PG+G KTA  +++  G ++ +LA   ++ +      K   + IA 
Sbjct: 193 LLALQGDKADNIPGLPGVGEKTALAMLQGVGGVEAILANPEKMPELGFRGAKTMPAKIAE 252

Query: 235 NADLARISRELVRLRTDAPVPVPLSELDVKPPAPEKLAAFCAAQGFRSLMGRLNAKIPTA 294
           + D+ ++S EL  ++ D  +     +L+++    ++L        F+    R  A++   
Sbjct: 253 HGDMLKLSYELATIKCDVELEQDWHQLNIQGADRDELIKCYGEMEFK----RWLAEVLDN 308

Query: 295 APTATRAVLPTEAPAEAPSLPPKVETAYELVTDLAALENWIALATGGGLVGFDTETTGLD 354
             +A+      E PA     P  ++T Y+ +    AL+ W+       L   DTETT L+
Sbjct: 309 KSSASSQEEADEVPA-----PQAIDTQYDTILTWEALDEWLKALAAAPLFALDTETTSLN 363

Query: 355 PLRARLVGVSLAVAPGRACYIPVLHAPAQAQGDLLGGPSTDAPQIIPAAETLARLKPLLA 414
            + A++VG+S A+ PG+A Y+P+ H  A            DAP+ + + + LA+LKPLL 
Sbjct: 364 YMEAKMVGLSFAIEPGKAAYLPLAHDYA------------DAPEQLDSEQVLAKLKPLLE 411

Query: 415 DPSVLKVGHNIKYDMQVMAMQGLAVEPFD-DTMLLSYALDGASHGHGLDELCLLHLGHAN 473
           DPS+LKVG N+KYDM ++A  G+A++    DTML SY  +  +  H +D+L L +LGH N
Sbjct: 412 DPSLLKVGQNLKYDMSILANVGIALKGVAFDTMLESYVFNSVASKHNMDDLALKYLGHKN 471

Query: 474 IPFSEVCGSGRNQVTFDRVPLDKARDYAAEDADMTLRLHALLKPRLL-SERMVSVYETLE 532
           I F E+ G G  Q+TF+++PL+ A  YAAEDAD+TLRLH  L PRL  +  + SV+  +E
Sbjct: 472 ISFEEIAGKGVKQLTFNQIPLETAAPYAAEDADITLRLHQHLWPRLQKASELASVFTDIE 531

Query: 533 RPLVPVIAAMERDGIKVDRAQLMALSEDFGRRLTELETEVIALNNGEAFNLGSPQQLGKV 592
            PLV +++ +ER G+ +D   L   S++  R++ ELE +   +  GE FNLGS +QL  +
Sbjct: 532 LPLVSILSQIERQGVLIDSMLLGQQSDELARKIDELEQKAYEIA-GEPFNLGSTKQLQAL 590

Query: 593 LFETLNLPGGKKTKTGQWATGADVLEELAPLHALPARLLDWRQLSKLKGTYTDALVAQIN 652
            FE L  P  KKT  G  +T  +VL ELA  + LP  +L+ R LSKLK TYTD L   ++
Sbjct: 591 FFEKLGYPVLKKTPKGAPSTAEEVLVELALDYPLPKIILEHRSLSKLKSTYTDKLPLMVD 650

Query: 653 PATGRVHTSYSLAATTTGRLSSSDPNLQNIPIRTEEGRKIRHAFVAEPGKKLVSADYSQI 712
             TGRVHTSY  A   TGRLSSS+PNLQNIPIRTEEGR+IRHAFVA  G+K+++ADYSQI
Sbjct: 651 GKTGRVHTSYHQAIAATGRLSSSEPNLQNIPIRTEEGRRIRHAFVAPEGRKILAADYSQI 710

Query: 713 ELRLVAHVAEIAGLRDAFAHGADIHAITASQVFGVPLDGIDPALRRRAKAINFGIIYGIS 772
           ELR++AH+++  GL  AFA G DIH  TA++VF V    +    RRRAKA+NFG+IYG+S
Sbjct: 711 ELRIMAHLSQDKGLLSAFAEGKDIHRATAAEVFDVDFSEVTSEQRRRAKAVNFGLIYGMS 770

Query: 773 AFGLAAQLGIPQGEAKAYIEAYFARYPEIRAYMERTKEEARDQGFVTTLFGRKVFTPGIK 832
           AFGLA QL IP+ EA+ YI+ YF RYP +  YME T+  A +QG+V+TL+GR+++ P IK
Sbjct: 771 AFGLARQLDIPRHEAQQYIDIYFKRYPGVLKYMEDTRAAAAEQGYVSTLYGRRLYLPAIK 830

Query: 833 DKNGAMRAFAERAAINGPIQGGAADIIKRAMIRLPAALAAAGL-SARLLLQVHDELVLEA 891
           D+N   R  AERAAIN P+QG AADIIK+AMI +   +         +++QVHDELV E 
Sbjct: 831 DRNAMRRQAAERAAINAPMQGTAADIIKKAMINIAQWIETETQGEITMIMQVHDELVFEV 890

Query: 892 PEAEADATVAVVKQVMEAAASLSVPLLVEAGIADTWGAAH 931
              +AD+    V ++M  AASL V LL EAGI D W  AH
Sbjct: 891 DADKADSLKLKVCELMAQAASLDVELLAEAGIGDNWEQAH 930