Pairwise Alignments

Query, 311 a.a., tRNA pseudouridine(55) synthase TruB from Magnetospirillum magneticum AMB-1

Subject, 313 a.a., tRNA pseudouridine synthase B from Marinobacter adhaerens HP15

 Score =  173 bits (439), Expect = 4e-48
 Identities = 109/266 (40%), Positives = 141/266 (53%), Gaps = 4/266 (1%)

Query: 1   MARKRKGDPVNGWLAIDKPLGIGSTQVVAKVKRLLNAAKVGHGGTLDPLASGILPIALGE 60
           M+R+RKG  VNG L IDKP G+ S  ++ +VKRL  AAK GH G LDPLA+G+LP+  GE
Sbjct: 1   MSRRRKGRDVNGILVIDKPAGVTSNGILQQVKRLFGAAKAGHTGALDPLATGVLPLCFGE 60

Query: 61  ATKTVQYVMDGSKTYRFQVRWGEATASCDRESEVIETSPHRP--TAEAIAAALPAFLGEI 118
           ATK  Q ++D  K Y    R G  T + D E  V+   P     TAE +   L  F G+I
Sbjct: 61  ATKFSQMMLDSDKAYIATARLGVRTETGDSEGAVVAEKPVPAGLTAEVLEPLLDGFRGDI 120

Query: 119 DQIPPAYSAIKIDGQRAYDLARAGEEVEIKPRRVAIKSFTLLGQPDADHADFEVHCGKGT 178
            Q+P  YSA+K  G+  Y+ AR G EVE   R V I   TLL   + +  D  V C KGT
Sbjct: 121 QQVPSMYSALKHKGRPLYEYAREGIEVERPARPVTIYELTLLDIRE-NELDIAVSCTKGT 179

Query: 179 YVRSLARDLSLALGTVGHVSVLRRIACGPFNEQNAISLESLEDLSQVPAPWTFLLPI-ET 237
           Y+RSL  D+  ALG   HV+ LRR     F   +A ++  LE + +       LL   + 
Sbjct: 180 YIRSLVEDIGEALGCGAHVTALRRTMASGFTLADAHAVSDLEAMRERGESLDGLLVAPDA 239

Query: 238 ALDDIPALALTESEARRLQSGNPVSI 263
           AL   P   L       + +G PV I
Sbjct: 240 ALSMFPEHRLAGQALVSILNGQPVRI 265