Pairwise Alignments

Query, 152 a.a., 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH from Magnetospirillum magneticum AMB-1

Subject, 173 a.a., rRNA large subunit methyltransferase from Caulobacter crescentus NA1000

 Score =  103 bits (258), Expect = 1e-27
 Identities = 71/160 (44%), Positives = 89/160 (55%), Gaps = 16/160 (10%)

Query: 1   MRLLIAAVGKAKAGPEQDLFRQYCRR---------LSPPPVLKEVEEKRPLAGPQLKARE 51
           M++ I  VGK     E  L   Y  R         L P  +L EVE ++P      KA E
Sbjct: 20  MKITILTVGKLGRMVEAQLALDYASRATASGRALALGPVDIL-EVEARKPG-----KAAE 73

Query: 52  AELLLATLPEGAKVVALDEKGRDIGSVDFAHRLRDWRDSGCQDVAFLIGGADGHGDAVRE 111
           AE+L   L EGA VVA DE G+   S  FA  L   RD G + V FLIGGADG   ++  
Sbjct: 74  AEVLRPHL-EGAYVVACDEHGKAWKSRAFADHLARLRDDGNRRVVFLIGGADGLDPSILA 132

Query: 112 RADLLLSFGRMTWPHMLVRALLAEQLWRAHSILTGHPYHR 151
            A+  ++FG  TWPH L RA+LAEQ++RA +IL+G PYHR
Sbjct: 133 AANETMAFGVQTWPHALARAMLAEQIYRAATILSGSPYHR 172